Daucus carota (carrot): 108225390
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Entry
108225390 CDS
T05350
Name
(RefSeq) probable tocopherol cyclase, chloroplastic
KO
K09834
tocopherol cyclase [EC:
5.5.1.24
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00130
Ubiquinone and other terpenoid-quinone biosynthesis
dcr01100
Metabolic pathways
dcr01110
Biosynthesis of secondary metabolites
dcr01240
Biosynthesis of cofactors
Module
dcr_M00112
Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
108225390
Enzymes [BR:
dcr01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.24 tocopherol cyclase
108225390
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GFIT
Motif
Pfam:
Tocopherol_cycl
Motif
Other DBs
NCBI-GeneID:
108225390
NCBI-ProteinID:
XP_017255764
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Position
1:41485108..41493485
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AA seq
489 aa
AA seq
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MAMNICSSLHNTNTSSPFYSPNSALIHSSKLFKPSLNYQNRRQFRRTTIQSVSNIDANVA
EPQIKPVYTPTPTDRNLRTPHSGYHYDGSARKFFEGWYFKVAIPECRQSFCFMYAVQNPL
FRKKLTALEEAQYGPRWTGVAAQILGADDKLIVQSSEESQNFWGSRHELMLGNTFVARDN
LKSPKKETPPQDFNKRVLEGFQVTPLWHQGSISDDGRNNFAEVVKTARWEYSTRPVYGWG
NVGSKQKATAGWLAAFPVFEPHWQICMAGGLSTGWIEWDGERFEFENAPSYSEKNWGGAF
PRKWFWVQCNVFEGATGEVALTAGGGLRQLPGLSEKFENAALIGVHYEGVLYEFVPWNGV
VEWEISPWGCWQISAENKTHKIELEATTQYSGTPLRAPTTESGFAPACKDTCWGDLTLKM
WERSSNGSKGKLILDTTSNMAAVEVGGGPWFNSWKGRTFTPEVLNRALNVGVDVEGLFNF
VPFLKPPGL
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgaacatctgttcttcgctccataacacgaacacttcctcccctttttattct
cccaattcagccttaattcacagctccaagctattcaaaccttctctaaattatcaaaat
aggcgtcaatttcgccgcactactatacaatcagtctcgaatatcgatgcaaatgtagca
gaaccgcagattaaacctgtgtatacacctacgcccactgatcgtaatcttcgcactcct
cacagcgggtatcattatgacggaagtgctagaaaattctttgagggttggtactttaag
gttgcaataccggagtgtaggcaaagtttttgttttatgtatgctgtacagaatcccttg
tttcgcaaaaaattgactgcactggaggaggctcagtatggacccaggtggactggagtt
gcggctcagattcttggtgctgatgacaagcttattgtccaatcatctgaagaatctcaa
aacttttggggaagtaggcatgaactaatgcttgggaatacttttgtggcaagagataac
ttgaagtctccaaaaaaggaaacacctcctcaggatttcaataaaagagtattggaagga
ttccaagttaccccactttggcaccaaggttcaatttctgatgatggaaggaataatttt
gcagaagttgtaaaaacggcgcggtgggagtacagtacccgtcctgtctatggctggggt
aatgttggatccaaacagaaagcaacagcaggatggcttgctgcatttcctgtgtttgaa
cctcattggcaaatatgcatggccggaggcctctcgacaggttggatagagtgggatggt
gaaagatttgaatttgaaaatgccccctcatactctgagaaaaactggggaggagccttt
ccgagaaaatggttctgggttcaatgtaatgtattcgaaggcgctacaggggaagttgca
cttacagctggtggtggacttaggcaactgcctggactgagtgagaaatttgaaaatgct
gcgttgattggagtacactatgaaggagtgctttatgaatttgtaccatggaatggagta
gttgaatgggagatttctccatggggttgctggcaaatttctgcagagaacaaaacccat
aagatagagttggaggcaacaactcagtattcaggtacaccactgcgtgctccaaccaca
gaatctggttttgctcctgcttgtaaagatacgtgttggggtgacttaacactgaaaatg
tgggaacggagctcaaatggcagtaaagggaagcttattttggatactactagcaacatg
gcagcagtagaagttggaggaggaccatggttcaatagctggaaaggccggacatttaca
ccagaagttctaaatcgcgctcttaatgttggtgttgatgttgaggggttatttaatttc
gttccattcctcaagccccctggtttatag
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