Daucus carota (carrot): 108226782
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Entry
108226782 CDS
T05350
Name
(RefSeq) 13 kDa ribonucleoprotein-associated protein-like isoform X1
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03008
Ribosome biogenesis in eukaryotes
dcr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108226782
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108226782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108226782
03009 Ribosome biogenesis [BR:
dcr03009
]
108226782
Spliceosome [BR:
dcr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
108226782
Ribosome biogenesis [BR:
dcr03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
108226782
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
108226782
NCBI-ProteinID:
XP_017257263
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All DBs
Position
6:complement(18346481..18349308)
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AA seq
134 aa
AA seq
DB search
MSAEIVNPKAYPLADSLITVTIFDLVQEAANYKQLKKGANESQLLNPIVFICVKSNTFMV
LCKLKCYVLLCVCVCFYMMINWLGLISATKTLNRGISEFLVMAADTEPLEIHLHLPLLAE
DKDVMPLDYMPLQA
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagaaatagtgaacccaaaggcatacccattagctgattcactgataaccgtc
acaatttttgaccttgttcaggaagctgctaattacaagcaacttaagaagggtgctaat
gaaagtcagctcttaaaccccattgtatttatatgtgtaaagtccaatactttcatggtt
ctttgtaaattaaaatgttatgtactattatgtgtatgtgtgtgtttttatatgatgatt
aattggttgggtttgatttctgcaacaaagacactgaacagaggaatttcagagtttctg
gtgatggctgctgatactgagcctctcgagattcatctccatctcccccttcttgctgaa
gacaaggatgttatgcctctggattatatgcctctccaggcttga
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