Dendrobium catenatum: 110099273
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Entry
110099273 CDS
T05027
Name
(RefSeq) ABC transporter I family member 20
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
dct
Dendrobium catenatum
Pathway
dct03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110099273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dct03019
]
110099273
Messenger RNA biogenesis [BR:
dct03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110099273
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_15
SMC_N
Arf
Zeta_toxin
AAA_25
AAA_23
AAA
ORC-CDC6-like
AAA_24
Motif
Other DBs
NCBI-GeneID:
110099273
NCBI-ProteinID:
XP_020682029
LinkDB
All DBs
Position
Unknown
AA seq
338 aa
AA seq
DB search
MGKEIGGSGAATSSADKAAETAIVEIRNLRFTYPGIDGHPPPGSKPLIDGFSLQLHAGDR
CLLVGSNGAGKTTILKILGGKHIVDPDMVRIMGRSAFHDTALTSSGELSYLGGEWRRDVA
FAGFEVTIQMDISAEKMIYGVSGVDPQRRDELIKVLDIDLSWRMHRSSDGQRRRVQICMG
LLKPFKVLLLDEITVDLDVVVRSNLLIYLKKECERRGATIIYATHIFDGLEDWPSHIVYV
AHGKLQLALPLDKVKELSNLSLMRTVEKWLRKERDEDRKRRKERKENGLPEYENSVDGTR
VTGDPARMLNNGWAAGRLHSTVAGEENFYFSSNRVLRQ
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggagatcgggggctcgggcgcagccacttcctccgccgacaaggcggcggaa
acggcaatagtggagatccggaacctccggttcacatatccggggattgatggtcacccg
cctcctggatccaagccactaatagacggcttctccctccagcttcatgctggtgaccgc
tgcctgctcgtcggatctaatggagccggaaagacaacgatactgaagatattgggaggc
aagcacatagtggatccagatatggtgcgtattatggggagatcggcgttccatgatact
gcccttacgtcctccggagagctttcctacctgggcggagaatggaggagagatgttgct
tttgcaggttttgaagttacaatacaaatggacatttcagctgagaaaatgatatatgga
gtttctggtgttgatcctcaaaggagagatgaactaatcaaggtcttagatattgatctt
tcttggagaatgcatagatcatcagatggtcagagaaggcgcgtgcaaatttgtatgggc
cttcttaaaccattcaaggttcttcttcttgatgagataacggttgacctagatgtagtg
gttaggtcaaaccttttgatatatctaaagaaggaatgtgaaagaaggggtgcaacaatt
atttatgcaactcatatatttgatggtcttgaggattggccatcgcatattgtttatgtt
gcacatgggaagttgcaattagcattgcctttagataaagtaaaagaattgagcaacctt
tctttgatgagaacagtagagaagtggttgagaaaagagagagacgaggacaggaagagg
agaaaggagaggaaggaaaatggacttccagaatatgagaattctgttgatggtacccgt
gtgacaggagatcctgctcgaatgctcaacaatggctgggctgcaggaaggttgcattcc
actgttgcaggcgaggagaacttctatttcagttcaaatagggtcctcaggcagtag
DBGET
integrated database retrieval system
