Dendrobium catenatum: 110104645
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Entry
110104645 CDS
T05027
Name
(RefSeq) nuclear pore complex protein GP210 isoform X1
KO
K14314
nuclear pore complex protein Nup210
Organism
dct
Dendrobium catenatum
Pathway
dct03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110104645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dct03019
]
110104645
Messenger RNA biogenesis [BR:
dct03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110104645
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_GP210_15th
Ig_GP210_16th
Ig_NUP210_7th
Ig_NUP210_1st
Big_2
Ig_NUP210_3rd
Ig_NUP210_2nd
Ig_NUP210_6th
DUF2807
Motif
Other DBs
NCBI-GeneID:
110104645
NCBI-ProteinID:
XP_028554027
LinkDB
All DBs
Position
Unknown
AA seq
1967 aa
AA seq
DB search
MVPLAAVIVGLLLPLAAAATSSSGPHIADLNILLPPRLTNPVQYRLQGSDGCFSWSWDHH
DLLLVQPEYNGSSQCSTSAKLISIAPYSDRKETAVYATDLRTGSMVRCKVLIDKISRIKI
FHHAVKINLDDLATLHITAFDDEENVFSSLVGLRFSWKLIPKSLDESMHHLIHVPLKETP
LGDCVSGFCEDLDVQLQLEDKGLGSDLYVVKGIGIGHEIVKAKLLEPQLEHVEDEITLTV
AEAMSLDPPSPVFVTVGSLIYYSLRVIHRNTHRVIELPSPHHQWSVQNCSVARVDSMMGT
VYAVRLGMTNVVVEDTRVSGHIQTSALHVVLPDNLLLYLVPVTSSIDAVEGIDPIPSSGV
WYVFPGQLYIIYMKVFSEGPDSNEILITENTDLKLEDNAFVSWDILPVSNADAAKYGWRN
SRLLKPYSLGEGTLTASLFYHSENNEEVQVLEVVQAVTVCRKVKFSIKEQVESLDSIRIP
WAPGIYQEIQLNATGGCGKLFWLSANEAIVSVTASGFVRAKRLGTTTIKVFSLFDSINCD
EVVLEVTSPSAMVVLPIYPVEVEVGTELKAAVSLKTSDGNYFYQCDAFNSFMKWNVFSES
ETFRALNTTEKICEADMLHLTEISKQSYVQPCAWTCLFAYGTGRAMLHATLSIDLHSPFH
FMDGPLILKTAFPIAAYSPLVAYQAGNGNRFGGYWIDVPEINNGIKHSYSTALDELYLAP
GSAMDVHLSGGPERWDLHVEYVESVEVTGEQNLPVTDGVQVQQTHCNGRRLYTALCLSVG
QFKLLFSRGNLVGVNHPVATIANLELSVMCSFPSSIALVANEPANTLDVIEIAANAYRGP
GQVRSSPITVAYGCTIRIAAVGLHITKKVFANSSSLCLSWELIGCKDLAYWRDNESCKRS
MNNSWERFLVLSKISGLCTVRASVIGFSKTMVSHPLGKEYLRVESATGILTDALQLQLVP
SLRVLPEFLLIVFDPEAKANLSISGGTCFLDAVTNDTHVARIAQPSENTKCSHLIVSPNG
LGTALMTIRDIGLSPPLVAFSLVKVANVEWIKIASEEEISLMEGTIRTFEVVAGTNDGYI
FESSQFAFMNIHVHLEDGIVEVIGKNNSSSIVMVCSNFSVRAATVGITTIYVRARQRSGH
ERLSQSVKVEVYKPLQLHPDYIYLTPGSSYLLTAKGGPITGGFMEYASMDEATAVVQASS
GKLSAISIGNATVRAAVYGQTGELICEAYSRVEVGVPSIMILSSQSDQLCIGCKMPIFPS
FLQGSLFSFYEVCNNYEWTVDNEKTVHREDGGSLTSVVEKVQLQCADGWSTFCNFSDSDV
GFIKELFGRSSGRAEVSVSFSCDFLLSGTTQTVHYTASKTLTVVPDPPLALGMPITWVLP
PSYTTSDLLPSLTDSYGLDVHSHRKGVVYSVLRTCESKHDSISIHGGKIRTRDSNDLACI
LGKDLTTRRTEIASCVRVAQVAQVRVSAGENSFHSAYLGVNARLELKIDYCDELGFKFAE
ANGVVPLDVEINYPNVLSIQMSDAGSITSAEKIILQAKGPGRALARISISHNPNKAEFIL
VSVGAQLYPQNPVLNVGNAINFSVIADDGLLPGQWFCSNESVLSLNKITGEAHASAVGRT
QVFFQSSNFKLQTVASVIKLNQIIVDTPSGTLTNAPFPSKGYKFDVKLSDLSGYKYKYSG
DHFEVPFDCRVDPPMLGYAKPWIDDVVGDFCCLFFPYTPKHLQINFSKSKDLQSKEINNS
EGFLYVTIIASLKEAPYVTGSAHAIFVGGFSTEIEQLNLSRSYNQSRITVTGNTDLELYW
NLKDILLVTSISKEGSGIGGFAEYDVKVLKSQSFKDKIIFVLPATGQKAEVDVTYEDGTS
AASARASSITWSAVIICVIVLILTFFLFLKLLDRPTRPVTTRPTAPFSSAVTGPSTPQPP
SALANSPFSPRTPQPFVEYVRRTIDETPYYKRDGRRSSTYLGMHWSD
NT seq
5904 nt
NT seq
+upstream
nt +downstream
nt
atggttccgctggctgctgtgatcgtcgggcttctgctgccgctggcggcagcggcgacg
tcgtcctctggcccccacatagcagacctcaacattttgttgccccctcgcttgacgaat
cccgtgcagtaccgacttcaagggagtgatggctgcttctcctggtcatgggatcatcat
gatcttctattagtccaacctgaatataatggtagcagtcaatgctccacaagtgccaaa
ttgatatcgattgctccatatagtgataggaaagagactgctgtctatgctacagaccta
cgaactggatctatggttcgctgtaaagttcttattgataaaatttccaggattaaaata
tttcatcatgctgtcaaaattaacttggacgatctagcaacactacatattacggcattt
gatgatgaagaaaacgtgttctcatcattggttggcttacggttttcatggaagctaatt
cccaagtctttggatgagagtatgcatcatcttattcatgttccactgaaggaaacacct
cttggtgactgtgttagtggtttttgtgaggatctggatgtccaacttcagttggaagat
aaggggttaggttctgatttatatgttgtcaaaggaattggaattggccatgagattgtt
aaagccaagttgcttgagccacaactagaacatgtggaggacgagattactttaactgtt
gcagaagcaatgtccctagatcctccctcacccgtctttgtgactgttggttcattgata
tattacagtctcagggttattcatagaaatactcatcgagtgattgagttaccctctcca
catcatcaatggtctgtgcagaattgttcagtggctagagtggatagtatgatgggaaca
gtttacgctgtgcgcctaggaatgactaatgttgttgttgaagataccagggtttctggt
catattcaaacttcagccctgcatgttgtactaccggataatttgttgctataccttgta
cctgtcactagctctattgatgcggttgaagggatagatcctattccttcttcaggcgtc
tggtatgtttttccaggccaactgtacataatttatatgaaggttttctcagaagggccg
gattcaaatgagatactcatcaccgagaacactgaccttaagttggaagataacgctttt
gtgtcttgggatatattgcctgtttctaatgctgatgctgcaaaatatggctggcgaaat
tcaagattactcaaaccatattctttgggagagggcactctaacagcttctctgttttat
catagtgaaaacaatgaagaggttcaggttcttgaggttgtgcaagcagtcactgtatgt
agaaaagtgaagtttagtataaaagaacaagttgagtccttagattccatccgcataccc
tgggctcctggtatttaccaggaaatacaactgaatgcaactggaggttgtggcaagctg
ttttggttatctgctaatgaggcaattgtatcagtgactgcttctggttttgtgcgggcc
aaaaggcttggtacaacaacgattaaagtattctcattgtttgattcaataaattgtgac
gaggttgttttggaagttacttcaccttctgcgatggttgttcttccaatctatcctgta
gaggtggaagttggaactgaactgaaagctgctgtgagcttaaagacatctgatggtaac
tacttttatcaatgtgatgctttcaactctttcatgaagtggaatgttttttctgaaagt
gaaactttcagagctctgaacacaactgagaagatatgtgaagccgacatgctccatctc
acagagatctccaagcaatcctacgttcagccttgtgcatggacttgtttatttgcttat
ggtactggcagggccatgctacatgcaactttgtcgattgacttacattctcctttccat
ttcatggatgggcctttaattttaaaaacagcttttcctatagctgcatattctccactt
gttgcttaccaggcaggaaatggaaatagatttggaggctactggattgacgtgcctgaa
ataaataatggaatcaaacattcgtactctacagctttggatgagttgtatcttgcccct
ggctctgctatggatgtccatttaagtggaggacctgaaagatgggatctacatgttgag
tatgttgaaagtgttgaagttactggtgaacaaaatctaccagtaactgatggtgttcag
gtgcagcagacgcactgcaatgggagaagattgtacacagctctatgcctttccgtgggg
cagtttaaacttctcttttcacggggaaaccttgttggcgttaaccatcctgtggcaact
atagctaacttggaattgtctgttatgtgtagctttccttcctccatcgcacttgttgct
aatgaacctgcaaatactctcgatgttatagagattgctgcaaatgcttaccgtggtcct
ggtcaagttcgttcttctcctatcacagtggcctatggatgtaccatacgcatagctgct
gttggtctacatattacaaaaaaagtttttgcaaattcatcatctttatgcttgagttgg
gaactaattggttgtaaggatctggcttattggagggacaatgagagttgcaagagatca
atgaataacagttgggagaggtttctagttcttagcaaaatttctggactgtgcactgtt
cgtgctagtgttattggcttctctaaaaccatggttagccatcccttgggaaaagaatat
ttgcgggttgaaagtgcaaccggtattcttacggatgctctccagttacagttggtgcct
tccttgagagtattgccagagtttctcttaatagtttttgatcccgaagcaaaggcaaat
ttgtctatttctggtgggacttgctttctagatgctgttacaaatgacacacatgtggca
cgcattgctcagccttcagaaaataccaaatgctctcacctaatagtcagtcctaatgga
ctgggtactgctcttatgaccattcgtgacattggactttctcctccgctggttgctttt
tctttggtcaaagttgcaaatgtggagtggattaagattgcttctgaagaagagataagc
ctcatggaagggactattagaacttttgaagttgtagcaggaaccaatgatggatatatc
tttgagtcctcccagttcgcatttatgaatattcatgtccatctggaggatggaatagtt
gaggttattggaaagaataattcttcaagcattgtaatggtttgctctaatttttcagtt
agagctgcaactgtgggaattacaactatttatgtccgggcgaggcaacggtctggacat
gaaagattaagtcaaagtgttaaggttgaagtttacaaaccattgcaattgcatcctgat
tatatttatctcacgcctggttcttcttatttgctcacagccaaaggtggtccaatcact
ggaggatttatggagtatgcaagcatggatgaagcgactgcagtagttcaggcatcttct
ggaaaactttctgctatatccattgggaatgctacagtccgtgctgcagtttatggacaa
acaggcgagctaatctgtgaagcatatagtagagtagaagtcggggtcccatcaataatg
attttgagttcgcagagtgaccagctatgtattggttgcaaaatgccaatctttccctcg
tttcttcagggaagcttattttctttctatgaggtatgcaataactatgaatggacggtg
gacaatgaaaagactgtgcaccgtgaagatggcggatccttgacatcagttgtcgagaaa
gtgcaattgcagtgtgcggatggatggtccactttctgtaatttcagtgatagtgatgtt
ggatttatcaaggaattgtttggacgatcttctggcagagcagaagtttctgtttcattt
tcttgtgacttcctattatccggcaccacacaaactgtacattacactgcttccaagacc
ttgacagtggtgcctgatcctcccctcgcacttggcatgccaataacatgggttctcccc
ccatcctatacaacttctgatcttctgccaagtttgacagactcttatgggttagatgtg
catagtcacaggaaaggagtcgtttattctgtattgaggacatgcgaaagcaagcacgac
tctatttctatccatggtggtaaaatcagaactagggacagcaatgatttagcttgcata
ctgggaaaagacctaactactcgaaggacggaaattgcatcatgtgtacgagttgcccag
gtggcacaagtaagggtatctgcaggagaaaattctttccattcggcataccttggtgtc
aatgcaaggctggagttgaaaattgactactgtgatgagttgggattcaaatttgctgaa
gcaaatggtgtggttccactggatgttgaaattaattacccaaatgtactatccattcaa
atgtctgatgctggaagtataacttctgctgaaaaaatcattctgcaggcgaagggtcca
gggagagctcttgcaaggatatcgatcagtcacaatccaaataaggcagagttcattctg
gtatcagttggtgcacagctgtatcctcagaatccggttctgaacgtggggaatgctatt
aatttttctgtaattgctgatgatggtcttctaccaggtcagtggttttgcagcaatgaa
agtgttttgtctctaaataaaattactggagaagctcatgcgtctgctgtaggtcgaact
caagttttctttcagagttccaacttcaaattgcagaccgtggctagtgtgattaaattg
aatcagattatagttgatactccatcaggcaccttaactaatgctccatttccttcaaaa
ggctacaagtttgatgtcaagcttagtgatctcagtggttacaaatacaaatactctggg
gatcattttgaagttccatttgactgtagggttgatcctcctatgcttgggtacgcaaag
ccatggattgatgatgttgtaggtgacttttgttgtctattctttccttatacaccgaag
cacctgcaaattaacttctccaaatccaaggatttgcagtcaaaagagataaataacagc
gaaggcttcttgtatgttaccatcattgcctcacttaaagaagctccatatgttacgggt
tccgctcatgcaatatttgtcggaggtttttcaactgaaattgagcagctaaacttgtca
cgtagttacaatcagagccggataactgtaactggtaatacagatttggaattatattgg
aatctgaaagacattttacttgtcacttcaatttcaaaagagggttctggcattggaggc
tttgcggaatatgacgtcaaagttcttaaaagtcaaagtttcaaggataaaattatcttt
gtccttcctgcgactggccaaaaggctgaagttgatgtgacctatgaggatggaacaagt
gctgcttcagcacgagccagtagcataacctggagtgcagttatcatttgtgttattgtt
ttgatcttaacgttctttctttttcttaagctactagacagaccaaccagaccagtaaca
acaaggccaactgcccctttctcatcagccgtaacaggcccctcaaccccacagcctcca
tcagcccttgccaacagtcctttctctccaagaacacctcagccctttgttgagtacgtg
aggaggacaattgatgaaacgccatactacaagagagacggcagaaggagctccacttat
ctaggcatgcattggtctgattga
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integrated database retrieval system
