Dendrobium catenatum: 110108343
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Entry
110108343 CDS
T05027
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13 isoform X1
KO
K16189
phytochrome-interacting factor
Organism
dct
Dendrobium catenatum
Pathway
dct04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
dct00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
110108343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dct03000
]
110108343
Transcription factors [BR:
dct03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
110108343
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_NPAS4
bHLH_LHW
DUF7302
Motif
Other DBs
NCBI-GeneID:
110108343
NCBI-ProteinID:
XP_020694614
LinkDB
All DBs
Position
Unknown
AA seq
497 aa
AA seq
DB search
MEEHSRSYQNYLAATNQKRTTGPDQEFTELQWKNGNVLMHSSTPRRCPTSITEVKEDPKP
LGNSTPQSSAMEDEIASLFQYPPYEYLEKEFGCDFLCDFPNPQTLITTDKSNKSINNEGN
AIPRLNLPHNQNRLSPPKSYVHGSAQQYVCPENSNVIDFSHLSKPGKIGLSNKLQKKIHS
AGGESSSMMTTESSICGSNQVQNCVNLTNSLNNKTTTGLPPKKFKKCLERSFLSERVRTD
TFEVTGTSSSGGSGFSIRATPQEMNNQSYKRKGVEMEESCSLSEEGDYESADGKKPVQRS
RRTRAAEVHNLSERKRRDRINEKMKALQDLIPHCTKSDKASMLDEAIEYLKSLQQQVQLM
WMGSGMATMMFPSIQNFMAQMSMGIGRGPMPTLNNLVQLPRVPLVNQPMPSVVAANQMPM
CPQPFSHLRFPNQMNNSQMPESFPPHLGFHHLQPPPQAMNLYTYGSHLAQQNQMGAINRS
SNLPTDGLPPDNFQNGK
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcattcaagatcgtatcagaattatcttgctgcaacaaatcagaaaagaaca
acaggacctgaccaagaattcacagagctccaatggaagaatggaaatgtattgatgcat
agctcaactcccagaaggtgtccaaccagcatcactgaagttaaagaagatccaaaacca
cttgggaattcaaccccccaatcctcagctatggaagatgagatagcttcattgttccaa
tacccaccttatgagtacttagagaaagagtttggttgtgatttcttatgtgattttcca
aatccacagactcttattactactgataaatcaaacaaaagcatcaacaatgaaggaaat
gcaattccacgtttaaatcttcctcacaatcagaacagattgtctcctcctaaatcttat
gttcatggctctgcacaacaatatgtctgccctgagaacagtaacgttattgatttctct
cacttgtcaaagccaggaaagattggattgtcaaataaactgcagaagaaaattcattcg
gcgggaggagaatcttcttcaatgatgacaacagaatctagcatttgtggaagcaaccaa
gttcagaattgtgtcaatctaactaatagcttgaataacaaaacaacaaccggtttgcct
ccgaaaaaattcaaaaaatgcttggagagaagctttttatcagaaagggtaaggacagat
acgtttgaagtgactggtacttcatcatcaggtgggtctggatttagcattagagcaact
ccacaagagatgaacaaccaaagctataaaagaaaaggagtagaaatggaagaatcatgt
agcttgagtgaggaaggagactacgaatctgcggatggaaagaagccagttcaaagatcc
cgtagaacccgagctgctgaggttcataatctatcagaaaggaaaagaagagacagaatc
aacgaaaagatgaaagcattacaggacctcataccacattgcaccaagtcagataaagca
tcaatgttagatgaagcaattgaatatttgaaatcacttcaacaacaagttcagttaatg
tggatgggaagcggcatggcaacaatgatgtttcccagcattcagaattttatggctcaa
atgagtatggggattggcagaggtcccatgcctacattgaataatttggttcaattacca
agagttccactagtaaatcaacctatgccctcagttgtagctgcaaatcaaatgccaatg
tgtccacaacccttcagccatttgaggtttccaaatcaaatgaacaattctcagatgcct
gaatcatttcccccacaccttggcttccatcatttacagccacccccacaggcaatgaat
ttatatacatatggatcccatttagcgcagcagaatcagatgggagcaataaatagaagc
agtaacttgccgactgatggattacctcctgataactttcaaaatggcaaatag
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