Dickeya parazeae: Dd586_0104
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Entry
Dd586_0104 CDS
T01138
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K03367
D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:
6.1.1.13
]
Organism
ddc
Dickeya parazeae
Pathway
ddc00470
D-Amino acid metabolism
ddc00552
Teichoic acid biosynthesis
ddc01100
Metabolic pathways
ddc01503
Cationic antimicrobial peptide (CAMP) resistance
ddc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Dd586_0104
09107 Glycan biosynthesis and metabolism
00552 Teichoic acid biosynthesis
Dd586_0104
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Dd586_0104
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
Dd586_0104
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
ddc01504
]
Dd586_0104
Enzymes [BR:
ddc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.13 D-alanine---poly(phosphoribitol) ligase
Dd586_0104
Antimicrobial resistance genes [BR:
ddc01504
]
Gene sets
CAMP resistance modules
Cationic antimicrobial peptide (CAMP) resistance, dltABCD operon [MD:
M00725
]
Dd586_0104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ACZ75002
UniProt:
D2C141
LinkDB
All DBs
Position
complement(126235..127782)
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AA seq
515 aa
AA seq
DB search
MFSSVLNPIQTRIRENPQHLAIVNDEGSYTFAQLGVRVEAIRQALKQHRPHCVMIYGHKQ
LDAAAAMLACAFEAITFTFVDIANPAARIAHIVAVTQANLLLLACPPRTALPPLSIPLCT
TASLPDTPSLTQPVRPAPEQIFYILTTSGSTGEPKGVKISYRNYDALASWAIPTLHGQRL
GVHVNHACLSFDLGIMDIFLTLAAGKALVMLDHVNNIRPRKNLSLLTQPALQIDSWFSTP
GFLEVMCSDPSFNQLTLPYLTCIAIGGEALLPPLVQTLHQRFPQATLLHCYGPTEATCMT
HAARVTPDDLPATPPLSLGHTNGHNNAMIVGELGEPLPVGMAGEVVLLGPQISPGYLPES
DQRNRLFSWRQGQRSYHTGDLGYLDAQGNLFVKGRNDGQIKWMGNRIEIGEIEAAANQLD
DVQQAVVVVRKQDNHVTELVLFIHLLSDTRERRDSLRRSLAQRLPAYMMPRIIRFTGPFP
LTLHGKTDRQALMQQCETDVPPEQGNSTTLYSSPK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgtcagttcttaatccgattcaaacccggatacgggagaacccacagcatctc
gccatcgttaacgatgaaggcagctatacctttgcgcagttaggcgtgcgggtggaagcc
atacgtcaggcgctaaagcagcaccgaccgcattgcgtgatgatttacggccacaagcaa
ctggacgccgccgccgccatgctggcctgcgcgtttgaggccatcacgttcacctttgtc
gatatcgccaatccagctgcccgtatcgcgcatattgtcgcggtgacacaggcgaacctg
ctattgctggcctgcccgccacgcaccgcgttaccgccgctatccatcccgctctgtact
actgcctcgctgccggataccccgtcgcttacccagccggtcaggcctgcacctgaacag
atattttatattttgaccacctccggcagcaccggcgagccgaagggggtgaaaatcagt
tataggaattacgatgcgttggcaagttgggcaataccgacactgcatggacaacgactt
ggcgtacatgtgaatcatgcctgcttatcgttcgatctgggcatcatggatattttcctg
acactggcggcaggtaaagcattggtcatgctggaccacgtcaataatatccgcccacgt
aagaacctctcactgctaacacaacctgcattacagatagacagttggttttccacaccg
ggttttcttgaagtgatgtgctcagacccaagtttcaatcaactcacgctgccctatctg
acatgtatcgccattggcggggaagcgttgttgccaccactggtacaaactctgcatcaa
cgttttccacaagcgaccttgttgcattgctatggtccaaccgaagcaacctgtatgaca
catgctgcacgtgtgacaccagacgacctccccgccacacctcctttatcactcggccat
actaacggtcataacaacgcaatgattgtaggtgagcttggcgaaccactacctgtcggt
atggccggtgaagttgtacttctcggcccacaaatcagccctggctacctgccggaatct
gatcagcgcaatcgcctttttagctggcggcaaggccaacgtagttaccatactggcgat
ctcggctatctggacgcacagggaaatctatttgtaaaaggccgcaatgatggccagata
aaatggatgggtaaccggatagaaatcggtgaaatcgaagcggcggcaaaccaattggac
gatgtacagcaagctgtcgttgttgtccgaaaacaggataaccatgtaaccgaactggtg
ttattcatccacctcttgtccgatacccgcgaacggcgcgatagccttcggcgttctctg
gcgcaacggctacccgcttacatgatgccgcgcattatccgcttcaccggtccgtttccc
ctgacattacatggcaagaccgatcgacaggcgttgatgcagcaatgcgaaaccgatgtg
ccaccagagcaaggcaatagcacgacgctctatagctcaccaaaatag
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