Dickeya parazeae: Dd586_1871
Help
Entry
Dd586_1871 CDS
T01138
Name
(GenBank) Pyridoxal-5'-phosphate-dependent protein beta subunit
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
ddc
Dickeya parazeae
Pathway
ddc00260
Glycine, serine and threonine metabolism
ddc00270
Cysteine and methionine metabolism
ddc00670
One carbon pool by folate
ddc01100
Metabolic pathways
ddc01110
Biosynthesis of secondary metabolites
ddc01230
Biosynthesis of amino acids
Module
ddc_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
ddc00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Dd586_1871
00270 Cysteine and methionine metabolism
Dd586_1871
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Dd586_1871
Enzymes [BR:
ddc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
Dd586_1871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
CBS
Motif
Other DBs
NCBI-ProteinID:
ACZ76731
UniProt:
D2BZ36
LinkDB
All DBs
Position
complement(2120217..2121584)
Genome browser
AA seq
455 aa
AA seq
DB search
MSIPTSVLSLIGNTPLLELTQFDTGPCRLFAKLENQNPGGSIKDRVALSMIEAAERQGKL
PPGGTLIEATAGNTGLGLALVAAIKGYQLILVVPDKMSREKIFHLRALGVDVRLTRSDVA
KGHPDYYQDYAQRLANEIPGAFYIDQFNNPANPLAHYRTTGPELWQQMEHDIDAIVVGVG
SGGTLGGLSRYFADVSPKTELVLADPAGSILTDYVRQGTIGDAGSWLVEGIGEDFLPTLA
NVSQVKHAYAISDQESFQAARELLLKEGVLAGSSSGTLLAAALRYCRAQTEPRRVVTLVC
DSGNKYLSKMFNDYWMIEQGLIQRPPLGDLRDLITYRHNEGATVSVSPDDSLAIVHARMR
LYDISQLPVLEHDRVVGVIDEWDLLNNLKANPRHFSLTARDAMTDQVNTLQKDASFDHLL
TTFDRGHVAIVLDGQRFLGLITRTDVLNHWRHRVR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtctattcctacatccgtgctcagcctgatcggcaacaccccgttgctggagctgacg
cagtttgataccggcccttgccggttattcgccaagctggaaaaccagaatcccggcggc
tcgataaaagatcgtgtagcgttatccatgattgaggccgccgaacgacaaggaaaatta
ccgcctggcggcacgctgatcgaagccaccgcgggtaataccgggctggggctggcactg
gtggcggctatcaaaggctaccagctgattctggtggtgccagacaaaatgagccgggag
aaaatcttccatctgcgcgcactcggtgtcgatgtacgcctgacccgatctgacgtcgcc
aaaggccacccggactattatcaggactatgcacaacggctggcaaacgagatccccggt
gcgttctacatcgaccagttcaataaccccgctaatccgctggctcactaccgcaccacc
ggcccggaactgtggcagcagatggagcatgacattgacgcgattgtggttggcgtcggc
tccggcggcacgctgggtggactgagtcgttactttgccgacgtatcaccgaaaaccgaa
ctggtactggccgatccggccggttctatcctgactgactatgtacggcaaggcacaatt
ggcgacgcgggcagttggctggtagagggcattggtgaggactttctgcccacgctggct
aacgtcagtcaggtaaaacacgcttacgccattagcgatcaggaatcgtttcaggccgcc
cgcgaactgctactcaaagaaggtgtgctggccggttcctccagcggcacactgctggcg
gcggcgctacgctactgccgcgcccaaactgaaccgcgccgggtggtaacgctggtgtgc
gacagtggcaacaagtacctgtcgaagatgttcaacgactactggatgattgagcaaggg
ttaattcaacgcccgccgctgggcgacctgcgcgatctgatcacctatcgccataacgaa
ggcgctactgtgtctgtctcccctgatgactcgttggcgatcgtgcatgcccgcatgcgg
ctgtacgacatttcccagttgccggtgctggaacacgaccgggtagtcggggtgattgat
gagtgggacctgctcaacaatctcaaagccaacccacgccatttctcgctgaccgcccgt
gatgcgatgaccgatcaggtcaacaccctgcagaaagacgcctcgttcgatcacctgctg
accacgtttgatcgcggccatgtcgccatcgttctggacggccagcgcttcctcggcctg
attacccgcaccgatgtgctcaatcactggcggcatcgggtgcgctga
DBGET
integrated database retrieval system
