Dickeya dadantii 3937: Dda3937_00204
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Entry
Dda3937_00204 CDS
T01305
Symbol
ygcF
Name
(GenBank) conserved protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
ddd
Dickeya dadantii 3937
Pathway
ddd00790
Folate biosynthesis
ddd01100
Metabolic pathways
Module
ddd_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
ddd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
Dda3937_00204 (ygcF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ddd03016
]
Dda3937_00204 (ygcF)
Enzymes [BR:
ddd01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
Dda3937_00204 (ygcF)
Transfer RNA biogenesis [BR:
ddd03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Dda3937_00204 (ygcF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
ADM99818
UniProt:
E0SDK8
LinkDB
All DBs
Position
complement(3858183..3858854)
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AA seq
223 aa
AA seq
DB search
MLYPINEMFQTLQGEGFFTGVPAVFIRLQGCPVGCSWCDTKHTWEKRPERQISLAEVLVK
SGESDAWSGSSAGDLIQQIARQGYTARHVVITGGEPCIHDLTPLTQALEQQGFSTQIETS
GTHEVRCSPNCWVTVSPKVNMRGGLAVLDQALQRANEIKHPVARERDIEALDALLARLDD
DKARVVALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgctttacccgattaacgaaatgttccagaccctgcagggcgaaggttttttcaccggc
gtcccggcggtgtttatccgtttgcaagggtgcccggtggggtgtagctggtgcgatacc
aaacacacctgggaaaaacggccggagcggcagatttcgctggcggaagtgctggttaaa
agcggggagagcgacgcctggagcggttccagcgccggggatctgatacagcagatagcg
cggcagggatacactgccaggcatgtggtgattaccggcggcgagccttgtatccacgat
ctgacgccgctgacgcaggcgctggaacaacaagggttcagcacccagattgaaaccagc
ggcacccatgaggtgcgttgttcacccaactgctgggtgacggtttcccccaaagtgaat
atgcgcggcggtctggcggtgttggatcaggcgttgcagcgggcgaatgaaatcaagcat
ccggtggcgcgtgagcgggatatcgaggcgctggatgcgttgctggcgaggttggatgac
gacaaggcgcgggtggtggcgctacagccgataagccaaaaggacgacgccacccggctg
tgcattgaaacctgcatcgcccgcaactggcgtttatcgatgcagacccacaaatacctc
aatattgcctga
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