Dickeya dadantii 3937: Dda3937_00589
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Entry
Dda3937_00589 CDS
T01305
Symbol
nth
Name
(GenBank) DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ddd
Dickeya dadantii 3937
Pathway
ddd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ddd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Dda3937_00589 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddd03400
]
Dda3937_00589 (nth)
Enzymes [BR:
ddd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Dda3937_00589 (nth)
DNA repair and recombination proteins [BR:
ddd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Dda3937_00589 (nth)
Prokaryotic type
Dda3937_00589 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ADM98446
UniProt:
E0SBX8
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All DBs
Position
complement(2374162..2374797)
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AA seq
211 aa
AA seq
DB search
MNKEKRIAILSRLRDNNPHPTTELKFSSPFELLISVLLSAQATDVSVNKATEKLYPVANT
PQGMLDLGVDGVKSYIKTIGLFNGKAENIIKTCRILLDQHQGQVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVCNRTHFAPGKTVEQVEEKLLKYVPAEFKVDCHHWLI
LHGRYTCVARKPRCGACLIEDLCEYKEKVDI
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagagaaacggattgccattcttagccgcctgcgagacaacaacccgcatcca
accaccgaactgaaattcagttcgccgtttgagctgctcatttcggtgctgctgtccgcg
caggccaccgacgtcagcgttaacaaagccacggaaaagctctatccggtggcgaatacg
ccgcaggggatgctggatttaggcgtagacggcgtgaagtcgtatatcaagaccatcggg
ctgttcaacggcaaggctgaaaacatcatcaaaacctgccgcattctgctggatcaacat
cagggccaggtgccggaagatcgcgcagcgctggaagccctgcccggcgtcgggcgtaaa
accgccaacgtggtgctgaataccgcctttggctggcccaccatcgcggtggatacccat
atctttcgcgtctgtaatcgaacccactttgcaccgggaaaaaccgtcgagcaggtggaa
gaaaaattactgaaatacgtcccggcggaattcaaggtcgactgtcaccactggctgatc
ctgcacggccgttatacctgcgtcgctcgtaagccgcgctgcggcgcctgcctgatagaa
gacttgtgcgaatataaggaaaaggtcgacatctga
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