KEGG   Dickeya dadantii 3937: Dda3937_02090
Entry
Dda3937_02090     CDS       T01305                                 
Symbol
ycfD
Name
(GenBank) hypothetical protein
  KO
K18850  50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
Organism
ddd  Dickeya dadantii 3937
Brite
KEGG Orthology (KO) [BR:ddd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ddd03009]
    Dda3937_02090 (ycfD)
Enzymes [BR:ddd01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.47  [50S ribosomal protein L16]-arginine 3-hydroxylase
     Dda3937_02090 (ycfD)
Ribosome biogenesis [BR:ddd03009]
 Prokaryotic type
  ribosomal protein modification factors
   Dda3937_02090 (ycfD)
SSDB
Motif
Pfam: JmjC_2 WHD_ROXA
Other DBs
NCBI-ProteinID: ADM98652
UniProt: E0SDG0
LinkDB
Position
2613358..2614479
AA seq 373 aa
MDYQLNLDWRDFLTHHWQKKPVIIKGGFRHFIDPITPDELAGLAMENEVDSRLVSHQGGR
WDVSHGPFESYDHLGESNWSLLVQAVDHWHEPSAALMRPFRQLPDWRIDDLMISFSVPGG
GVGPHLDQYDVFIIQGTGRRRWRVGDKVPMKQHCPHPDLLQVAPFDAIIDEELEPGDILY
IPPSFPHEGYSLENSLNYSVGFRAPSSRELVSGFADYVLSRELGGQRYSDPDIPARPHPA
DILPQELDKLQHMMLDLVQHKDAFRQWFGEFVSQSRHELDLAPPEPPYQPGEMYDLLQQG
EALRRLGGLRVVRIGEDCFVNGEHLDSRQSQAIAVLAQYDVLDAKRLGDALDDPSFLAQL
TALVNSGYWYFVD
NT seq 1122 nt   +upstreamnt  +downstreamnt
atggactaccaacttaatctcgactggcgggattttctgacccaccactggcaaaaaaaa
ccggtaatcatcaaaggtggtttccgccatttcatcgatccgattaccccggatgaatta
gccgggctcgccatggaaaacgaggtggacagccgactggtcagccatcagggcggccgc
tgggatgtcagccacggtccattcgaaagctacgatcatctgggagaaagcaactggtct
ttgctggtgcaggcggtcgaccactggcatgaaccttccgccgcgctgatgcgccctttc
cgtcagttgcccgactggcgcattgacgacctgatgatttccttctcggtgccgggcggc
ggcgtcggtccgcatctggatcagtacgacgtgtttatcattcagggcaccggccgccgt
cgctggcgtgtgggcgacaaagtgccgatgaagcagcactgcccccatcctgacctgttg
caggtcgccccgttcgacgccattatcgatgaggaactggaacccggcgacattctctat
attccgcccagtttcccgcatgaaggctattcgctggaaaactcgctcaactactcggta
ggcttccgcgcgcccagctcccgtgaactggtcagcggttttgccgattatgtgctgtct
cgtgaactgggcggacaacgctacagcgacccggacattcccgcgcgcccacacccggcg
gacatcctgccgcaggagctggataaactacagcacatgatgctggatctggtgcagcat
aaagacgcgttccgccagtggttcggcgaattcgtctcccagtcgcgtcatgaactggat
ctggcgccgccggagccgccttatcagccgggcgaaatgtacgacctgctgcaacagggc
gaagcgttgcgccgtcttggcggattgcgggtggtgcgtatcggcgaggactgcttcgtc
aacggcgagcatctggacagccgccagtcgcaagcgatcgccgtgctggcgcagtacgac
gtattggatgccaaacgccttggcgacgcgctggacgatccctcgttccttgcccagttg
accgcgttggtcaacagcggttattggtattttgttgactga

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