Desulfitobacterium dehalogenans: Desde_3455
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Entry
Desde_3455 CDS
T02146
Name
(GenBank) UDP-N-acetylmuramyl-tripeptide synthetase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ddh
Desulfitobacterium dehalogenans
Pathway
ddh00300
Lysine biosynthesis
ddh00550
Peptidoglycan biosynthesis
ddh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ddh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Desde_3455
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Desde_3455
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ddh01011
]
Desde_3455
Enzymes [BR:
ddh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Desde_3455
Peptidoglycan biosynthesis and degradation proteins [BR:
ddh01011
]
Precursor biosynthesis
Amino acid ligase
Desde_3455
SSDB
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Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AFM01737
UniProt:
I4ACQ2
LinkDB
All DBs
Position
complement(3458888..3460375)
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AA seq
495 aa
AA seq
DB search
MRVKSVRKRLSEIIPGIEITNTVGDQETLIQGMVMDSRQVQPGDLYACVPGMNVDGHDFA
VQAIAKGAVALLVERILPLDIPQLQVNNVREVMGYLAANLYDHPAGKLEVVGVTGTNGKT
TITHLVEHIAAGEGKKVGLIGTLGARIAGRELPGSRTTPEAIDLQKLLREMVDEGVQYAV
MEVSSHALVLGRVKGCEFDAGIFSNLTQDHLDYHKTMEEYLQAKAILFSGLTGAKEPKVG
VINGDDPAGSTLIRLSAAPVVTYGVKAEHLDYRAEDIQLTADGVKFTVRFKGQSVQVEYS
TPGMFSVYNALAAFAWGVESGRSPQQVREALASVLGVPGRFESVRMGQPFQVIVDYAHTP
DGLENVCKTAQEFTQGRLITVFGCGGDRDKGKRPQMGAIAEELSDHVIVTSDNPRTEDPR
QIIRDILEGIEGIDYTANVNRREAIECACLLAKEGDTVLIAGKGHEDYQIIGKDVFPFDD
REVAREALRRLGYVG
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgaagtctgttcgcaaaagactctcagaaattatacccggaattgaaatcacg
aatactgttggagatcaagaaaccctgatccaaggaatggttatggattcacgccaggtt
caacccggagacctctatgcttgtgtacccggaatgaatgttgacggccatgattttgcg
gtccaagccattgccaaaggagcagtcgctttactggtggaacggattctccctcttgat
attcctcaactccaagtaaacaatgtgcgggaggtgatggggtatctcgcagccaatctt
tatgatcaccctgccggcaaactggaagtggtgggggtaacaggtactaacggaaaaaca
acaatcacacatcttgtggagcatattgccgcaggggaaggaaaaaaagtgggcttaatc
ggtactttaggagcccgcatcgcgggaagagagctgccgggaagccggaccaccccggag
gctattgatctccagaagcttctgagggaaatggtggacgaaggggttcaatatgccgtc
atggaagtctcttcccatgccttagtcttaggacgggttaaaggatgtgaatttgacgca
ggtattttcagcaatttgacacaagatcatttggattatcataaaacaatggaggagtac
cttcaggctaaggccatacttttcagcggccttacaggggccaaagagcctaaggtgggg
gttatcaacggggatgacccggctgggtcgaccttaatccggctttctgccgctcctgtg
gtgacctatggggtcaaagccgaacatttggattatcgggcggaggacatccagttgact
gccgatggggtgaaattcacggttcgttttaagggacaatcggtgcaggtggagtactca
actcctggaatgttcagtgtttacaatgctctggcggcttttgcctggggagtggagagc
ggaagaagtccccaacaggttcgcgaagccctggcatcggtccttggagtcccaggacgc
tttgaaagcgtgcggatggggcagccttttcaagtcattgtcgattatgcccatactccg
gatgggctggagaatgtctgtaagacagctcaggagtttactcagggacgcctgattaca
gtatttggctgcggcggggatcgggataaaggcaaacggcctcagatgggagccattgcc
gaggagctcagcgaccatgtgattgtaacttcagataatccccgtaccgaggatccccgg
cagattatccgggacattttagaagggattgaagggatcgattataccgctaatgtgaac
cgccgggaggcgatcgaatgcgcctgccttcttgccaaggaaggggatacagtgctgatt
gccggaaaaggtcatgaagattatcagatcatcggcaaagacgtgttccccttcgatgat
cgggaagtagctcgggaagccttaaggaggctcggttatgtgggatag
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