Dictyostelium discoideum (cellular slime mold): DDB_G0272320
Help
Entry
DDB_G0272320 CDS
T00245
Symbol
snrpb
Name
(RefSeq) LSM domain-containing protein
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DDB_G0272320 (snrpb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddi03019
]
DDB_G0272320 (snrpb)
03041 Spliceosome [BR:
ddi03041
]
DDB_G0272320 (snrpb)
03032 DNA replication proteins [BR:
ddi03032
]
DDB_G0272320 (snrpb)
Messenger RNA biogenesis [BR:
ddi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
DDB_G0272320 (snrpb)
Spliceosome [BR:
ddi03041
]
Complex A
U1 snRNP components
Sm proteins
DDB_G0272320 (snrpb)
U2 snRNP components
DDB_G0272320 (snrpb)
Complex B
U1 snRNP components
DDB_G0272320 (snrpb)
U4/U6.U5 tri-snRNP components
DDB_G0272320 (snrpb)
Complex C
U2 snRNP components
DDB_G0272320 (snrpb)
DNA replication proteins [BR:
ddi03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
DDB_G0272320 (snrpb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
8618309
NCBI-ProteinID:
XP_645139
dictyBase:
DDB_G0272320
UniProt:
Q55A45
LinkDB
All DBs
Position
2:complement(1283864..1284823)
Genome browser
AA seq
274 aa
AA seq
DB search
MSGMPKSSKMLQYINYRMRVTIQDGRVIVGRFLAFDKHMNVVICDAEEFRRIRQKGKEDR
EEKRTLGMILIRGETVVSMSVEAPPPEEAKLAATSKMPPQIPGGPGIGRAVGRGMPMGGM
GMGGSGPMSGLTGPVRGVGGPAPHSMMPGGGVPPPMGRGGFPPQGFPPGGPSPQGAFNNN
PNNNNGGPPQGFPPGGPIGRGGFPPQGFPPGGPMGGPNLNNGNMPPQGFPPGGPMGRGGF
PPQGFPPGGPNFNNMPPQGFPPGGPMGRGGFQRK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtatgcccaaaagtagtaaaatgttacaatacattaattatagaatgagagta
acaattcaagatggtagagttattgttggtagatttttagcatttgataaacatatgaat
gttgttatttgtgacgcagaggaatttagaagaattagacaaaaaggtaaagaggataga
gaagaaaagagaacattgggtatgattttaattagaggtgaaactgtggtttcaatgtca
gttgaggcaccaccaccagaggaagccaaattagcagcaacctcaaagatgccaccacaa
attccaggtggtcctggtattggtagagccgttggtagaggtatgccaatgggtggtatg
ggtatgggtggtagtggaccaatgtcaggtttgactggtccagttagaggtgttggtggt
ccagctccacattcaatgatgccaggtggcggtgttccaccaccaatgggaagaggtggt
ttccctccacaaggcttcccaccaggtggcccatcaccacaaggtgctttcaataataat
ccaaataacaataatggcggtccaccacaaggtttcccaccaggtggtccaataggtaga
ggtggtttcccaccacaaggtttcccaccaggtggtccaatgggtggcccaaatctcaat
aatggtaatatgccaccacaaggtttcccaccaggtggtccaatgggtagaggtggtttc
cctccacaaggtttcccaccaggtggcccaaacttcaacaatatgccaccacaaggtttc
ccaccaggtggaccaatgggtagaggtggtttccaaagaaaataa
DBGET
integrated database retrieval system
