Dictyostelium discoideum (cellular slime mold): DDB_G0278079
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Entry
DDB_G0278079 CDS
T00245
Symbol
exdl2A
Name
(RefSeq) 3'-5' exonuclease domain-containing protein
KO
K20777
exonuclease 3'-5' domain-containing protein 2 [EC:
3.1.11.1
]
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddi03400
]
DDB_G0278079 (exdl2A)
Enzymes [BR:
ddi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
DDB_G0278079 (exdl2A)
DNA repair and recombination proteins [BR:
ddi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
DDB_G0278079 (exdl2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
8621319
NCBI-ProteinID:
XP_642108
dictyBase:
DDB_G0278079
UniProt:
Q54YU4
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All DBs
Position
3:242964..245120
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AA seq
718 aa
AA seq
DB search
MLKNKNILTNLLNNNKKSFIGTSIIFIAFYWVYNNYIKQIDNKDKDNTENNNENNENNNI
VLNKTNDNSNIVKKVKFNNFFKLSNDIKIHVLSTPKECDLILNEFYQSLLLKMNDDKNSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPINTNTIIDGADILNQQQITTESNALLF
PNCSEINNDGLDFIIGFDAEWSNFNSIDDSTTTTTTTSKYNHKVALIQLSSKNETFLIQV
SQMEKIPTSLEQILTDPRLIKVGVAVSQDAATIFQTFSVVTKGCVDLVPIARLTNYEGNG
LASLALNVMNVTLDKSNLIRCSHWENKDLTNDQIHYAAADAWVGREIFEIMYNTYKNSKT
DPNEKDLIYTLCRPFINTSFKVKVEKSKNNNTGKPNPNKPIKENMLKKTVPDKRVLYDNC
LMYSPDDVLLCSISKKKVEWYVSRQLADIIKEEPLSIKLKFQPHGEGHSGDDYYLAHKEN
ICVVCGSTHKILRHSVVPHCYRQYLPEEIKSHSSHDVLLLCCDCHANMDKRAQIMRMMIA
KQYNVPLDSENKVYITDNTLLKITKMALIVKNHFYQQQEQQQEEEKTIINEDGSCSSSTN
KISNKKYKSNIPEYKLEEMKVEVANYIGKKEIDLKDLDQLIYLNPKQKNENYIPHEKQVM
EKVLALGEKGIFEFIRSWRKNFIETVQPKFLSQHWSINKDILNNYKPKNQKPKQIQLQ
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaaataaaaatattttaactaatttattaaataataataagaaatcatttatt
ggaactagtataatatttattgctttttattgggtttataataattatattaaacaaatc
gataataaagataaagataatactgaaaataataatgaaaataatgaaaataataatatt
gttttaaataaaacaaatgataattccaatattgttaaaaaagtaaaatttaataatttc
tttaaattatcaaatgatattaaaattcatgttttaagtacaccaaaagaatgtgattta
attttaaatgaattttatcaatcattattattaaaaatgaatgatgataaaaattcatca
tcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatca
tcatcatcatcatcatcatcatcatcatcatcatcaccaattaatacaaatacaattatt
gatggtgcagatatattaaatcaacaacaaataacaacagaatcaaatgcgttattattc
ccaaattgtagtgaaataaacaatgatggtttagattttataattggttttgatgctgaa
tggagtaattttaattctattgatgattcaaccacaactacaactacaacatcaaaatat
aatcataaagttgcattaattcaattatcaagtaaaaatgaaacatttttaattcaagtt
tcacaaatggagaaaattccaacatcattggagcaaattttaacagatcctcgtttaatt
aaggttggtgtcgcagtttcacaagatgcagcaactatttttcaaacattttcagttgtt
acaaaaggttgtgttgatttagtaccaattgcaagattgaccaattatgaaggaaatgga
ttagcaagtttagcattaaacgttatgaatgtaacattggacaaatcaaatttaattcgt
tgtagtcattgggagaataaggatttaacaaatgatcaaattcattacgcagcagctgat
gcatgggttggtagagaaatattcgaaattatgtataacacttataaaaactcaaaaact
gatccaaatgaaaaagatttaatttatacattatgtagaccattcattaatacaagtttt
aaagttaaagttgaaaaatcaaaaaataacaatactggtaaaccaaatccaaataaacca
attaaagaaaacatgttaaagaaaactgtacctgataaaagagtattatatgataattgt
ttaatgtatagtcctgatgatgtattattgtgtagtattagtaaaaagaaagttgaatgg
tatgttagtagacaattggcagatataattaaagaagaaccattatcaattaaattaaaa
ttccaaccacatggtgaaggtcattcaggtgacgattattatttagctcataaagagaat
atttgtgtagtttgtggttcaactcataaaattcttcgtcactctgttgtaccacattgt
tatcgtcaatatttaccagaggaaattaaaagtcattcctcacatgatgtattactatta
tgttgtgattgccatgctaatatggataaaagagctcaaattatgagaatgatgattgct
aaacaatataatgtaccattagatagtgaaaataaagtttatatcactgataatacttta
ttaaaaattactaaaatggcattaattgttaaaaatcatttttatcaacaacaagaacaa
caacaagaagaagaaaaaacaataataaatgaagatggtagttgtagtagtagtacaaat
aaaatttcaaataaaaaatataaatcaaatataccagaatataaattagaagaaatgaag
gttgaagttgcaaattatattggaaagaaagaaattgacttaaaggatcttgatcaatta
atttatttaaatccaaaacaaaagaatgaaaattatattccacatgaaaaacaagttatg
gaaaaagttttagctttgggtgaaaaaggtatttttgaatttattcgtagttggagaaaa
aattttattgaaactgttcaaccaaaattcttatcacaacattggtcaatcaataaagat
attttaaataattataaaccaaaaaatcaaaaaccaaaacaaattcaattacaataa
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