Dictyostelium discoideum (cellular slime mold): DDB_G0282243
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Entry
DDB_G0282243 CDS
T00245
Symbol
nhp2l1
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03008
Ribosome biogenesis in eukaryotes
ddi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DDB_G0282243 (nhp2l1)
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DDB_G0282243 (nhp2l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ddi03041
]
DDB_G0282243 (nhp2l1)
03009 Ribosome biogenesis [BR:
ddi03009
]
DDB_G0282243 (nhp2l1)
Spliceosome [BR:
ddi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
DDB_G0282243 (nhp2l1)
Ribosome biogenesis [BR:
ddi03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
DDB_G0282243 (nhp2l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
RNase_P_pop3
PELOTA_1
K1377
Motif
Other DBs
NCBI-GeneID:
8623481
NCBI-ProteinID:
XP_640305
dictyBase:
DDB_G0282243
UniProt:
Q54ST0
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All DBs
Position
3:5564223..5564709
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AA seq
129 aa
AA seq
DB search
MADSSNNEKAKPLADSKLTLTILDLIQQSNNLGQLKKGANECTKAVSRSTAEFVVLAADA
EPLEILLHIPLLCEDKNIPYVFVSSKSELGRACDVSRPVVACAVTVDDKSQLKSQITNVK
DSLDRLWIV
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atggccgattcttcaaataacgaaaaagctaaaccattagctgatagcaaacttactctt
accattttggatcttattcaacaatcaaacaatttaggccaattaaagaaaggtgctaac
gaatgtaccaaagccgtttcacgtagtactgctgaatttgttgttttagccgctgatgct
gaaccattagaaattttattacacattccattattatgtgaagataagaatattccatac
gttttcgtttcaagcaaatccgaactcggtagagcttgtgatgtttcaagaccagttgtt
gcttgtgctgttactgtcgatgataagagtcaattgaaatctcaaatcactaacgttaaa
gattcattagacagattatggatcgtttaa
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