Dictyostelium discoideum (cellular slime mold): DDB_G0292834
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Entry
DDB_G0292834 CDS
T00245
Name
(RefSeq) WD40 repeat-containing protein
KO
K10260
F-box and WD-40 domain protein 7
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
DDB_G0292834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ddi04131
]
DDB_G0292834
04121 Ubiquitin system [BR:
ddi04121
]
DDB_G0292834
Membrane trafficking [BR:
ddi04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
DDB_G0292834
Ubiquitin system [BR:
ddi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
DDB_G0292834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_C
WD40_Gbeta
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_SCAP
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_EIPR1
F-box-like
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR41
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
F-box
Beta-prop_IFT140_2nd
WDR90_beta-prop_4th
DUF1635
SR-25
PRANC
Motif
Other DBs
NCBI-GeneID:
8628894
NCBI-ProteinID:
XP_629376
dictyBase:
DDB_G0292834
UniProt:
Q54CP0
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All DBs
Position
6:complement(<2130562..>2132271)
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AA seq
569 aa
AA seq
DB search
MLGPDFQKYSNQSNYHFDSFPYENSYEEEEYQDKYKEIVFRDKWGPKYAIQQQQQQQVYA
PNKRNVSKKIGSPLSSPTLYSSSSSSSSSSSNCKNNNNQNINHYQHKKKDSKKLKEIIKN
LLLPNKFNPMKRITFISILPIEITMKIISYLPFQDVLSIQYVCSEWFLITCEEILWKSIY
QNYFQVYPNRELLLKKSEKSCQLHWREIFKQQHERESRWKGDRFKEAHLIGHTGTVWALH
LDDERVYTGSFDKTAKVWDTKTKKCRFTLAGHYYPIQCLDVNNNIMATGSLDNSIRIWDL
EKGKSKGILTTRAHNFDVFCLQQIGDQIISGSSDSTVKVWNIAEIINDSIEIPDTEEEEE
EALQDNVMNDPFAVNNSFTSLPDINEPDHVHTNIVSVNDKTSTRYRNHNLSSTHTFKHQS
CVTCLQVYGNILMSGGSDRVVRVWDLNTSQPIQILSGHNEGIRALQFNGNVLVTGSDDTT
VRVWDLRSKNSNISTLRGHNGSVRCLQWDGTTLITGSNDQSVRWWNLNYDSDQSKELFSF
NSSISCLQFTNSILMCGLSDSKVQINKFY
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgttaggtccagatttccaaaaatattcaaatcaatcaaattatcattttgatagtttt
ccatatgaaaattcatacgaagaggaagaatatcaagataaatataaagaaattgtgttt
agagataaatggggaccaaaatatgcaattcaacaacaacaacaacaacaagtttatgca
ccaaataaaagaaatgtttcaaaaaagattgggtcaccattatcatcaccaacattatat
tcatcatcgtcatcatcatcatcatcatcatcaaattgtaaaaataataataatcaaaat
attaatcattatcaacataaaaagaaagattcaaaaaagttaaaagaaattataaagaat
ttattattaccaaataaatttaatccaatgaaaagaattacatttattagtattttacca
attgaaattacaatgaagatcatatcatatttaccatttcaagatgttttatcaattcaa
tatgtttgttccgaatggtttttaattacatgtgaagagattttatggaaatcaatttat
caaaattatttccaggtttatccaaatcgtgaattattattaaagaaatccgagaaatca
tgtcaattacattggagagaaattttcaaacaacaacatgaaagagaatcaagatggaaa
ggtgatagatttaaagaggcccatttgattggtcacactggtactgtctgggcattgcat
ttagatgatgaaagagtttacactggttcattcgataaaaccgctaaagtttgggatacg
aaaaccaagaaatgtcgtttcactttggccggtcactattatccaattcaatgtttggat
gtaaacaataacattatggcaactggtagtttagataattcaattagaatttgggatttg
gagaaaggtaaatcaaaaggtatacttacaactcgtgctcataatttcgatgttttctgt
ttacaacaaattggtgaccaaattatttccggaagttccgattcaactgttaaagtttgg
aatattgcagagataattaatgatagcattgaaatccccgatactgaagaggaggaagag
gaagcacttcaagataatgttatgaatgatccattcgctgtaaataattcattcacaagt
ttaccagatattaatgaacccgatcatgttcataccaatattgtatcggtaaatgataag
acttcaacacgttatagaaaccataatctctcatcgactcatacattcaagcatcaatca
tgtgtaacatgtcttcaagtttatggtaatattttaatgagtggcggtagtgatcgtgtt
gttagagtttgggatttaaatacatctcaacctatccaaatactctctggtcataatgaa
ggtattagagctttacaattcaatggaaatgttttagtaactggttctgatgatacaact
gttagagtttgggatcttcgttcaaagaattcaaatatttcaacacttcgtggtcataat
ggttcagtacgttgccttcaatgggatggcactaccttaatcactggttcaaatgatcaa
tcagtacgttggtggaatttaaattatgattctgatcaaagtaaagaattattctctttc
aatagttcaattagttgtttacaatttacaaattcaattttaatgtgtggtttatcagat
tcaaaagttcaaattaataaattttattag
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