KEGG   Delphinus delphis (saddleback dolphin): 132434105
Entry
132434105         CDS       T11117                                 
Symbol
RBX1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1 isoform X1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
ddp  Delphinus delphis (saddleback dolphin)
Pathway
ddp03420  Nucleotide excision repair
ddp04066  HIF-1 signaling pathway
ddp04110  Cell cycle
ddp04114  Oocyte meiosis
ddp04120  Ubiquitin mediated proteolysis
ddp04141  Protein processing in endoplasmic reticulum
ddp04310  Wnt signaling pathway
ddp04350  TGF-beta signaling pathway
ddp04710  Circadian rhythm
ddp05170  Human immunodeficiency virus 1 infection
ddp05200  Pathways in cancer
ddp05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:ddp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    132434105 (RBX1)
   04120 Ubiquitin mediated proteolysis
    132434105 (RBX1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    132434105 (RBX1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    132434105 (RBX1)
   04350 TGF-beta signaling pathway
    132434105 (RBX1)
   04066 HIF-1 signaling pathway
    132434105 (RBX1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    132434105 (RBX1)
   04114 Oocyte meiosis
    132434105 (RBX1)
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    132434105 (RBX1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    132434105 (RBX1)
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    132434105 (RBX1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    132434105 (RBX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ddp04121]
    132434105 (RBX1)
   03400 DNA repair and recombination proteins [BR:ddp03400]
    132434105 (RBX1)
Enzymes [BR:ddp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     132434105 (RBX1)
Ubiquitin system [BR:ddp04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   132434105 (RBX1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     132434105 (RBX1)
   Cul2 complex
     132434105 (RBX1)
   Cul3 complex
     132434105 (RBX1)
   Cul4 complex
     132434105 (RBX1)
   Cul7 complex
     132434105 (RBX1)
   Cul8 complex
     132434105 (RBX1)
   Cul9 complex
     132434105 (RBX1)
DNA repair and recombination proteins [BR:ddp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      132434105 (RBX1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      132434105 (RBX1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-RING_11 DUF8003
Other DBs
NCBI-GeneID: 132434105
NCBI-ProteinID: XP_059881706
LinkDB
Position
11:94536558..94550699
AA seq 132 aa
MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKLESQLLKVRCLFVRA
RAESSCEHVSWS
NT seq 399 nt   +upstreamnt  +downstreamnt
atggcggcagcgatggatgtggataccccgagcggcacgaacagcggcgcgggcaagaag
cgctttgaagtgaaaaagtggaatgcggtagccctctgggcctgggatattgtggttgat
aactgtgccatctgccggaaccacattatggatctttgcatagagtgtcaagccaaccag
gcgtctgctacttctgaagagtgcaccgttgcgtggggcgtctgtaaccatgcttttcac
ttccactgcatctcccgctggctcaaaacacggcaggtgtgtccgttggacaacagagag
tgggaattccaaaagttggaaagccagcttttgaaagtgaggtgtttgttcgttagagcc
agagcagagtcgtcctgcgagcatgtctcttggtcatga

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