Dickeya dianthicola: DDI_0913
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Entry
DDI_0913 CDS
T05141
Name
(GenBank) RND efflux system, membrane fusion protein CmeA
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ddq
Dickeya dianthicola
Pathway
ddq01501
beta-Lactam resistance
ddq01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DDI_0913
01503 Cationic antimicrobial peptide (CAMP) resistance
DDI_0913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ddq03036
]
DDI_0913
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ddq02000
]
DDI_0913
01504 Antimicrobial resistance genes [BR:
ddq01504
]
DDI_0913
Chromosome and associated proteins [BR:
ddq03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
DDI_0913
Transporters [BR:
ddq02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
DDI_0913
Antimicrobial resistance genes [BR:
ddq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DDI_0913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
HH_MFP_RND
RND-MFP_C
BSH_CzcB
YknX_C
Beta-barrel_RND_2
HH_CzcB
BSH_CusB
HH_EMRA
RibLong
BSH_LcnD
Motif
Other DBs
NCBI-ProteinID:
ATO32081
LinkDB
All DBs
Position
complement(898908..900041)
Genome browser
AA seq
377 aa
AA seq
DB search
MLTGCDNKASQGGAQQGGAPEVGIITIKSQTLNIITELPGRTSAYRIAEVRPQVNGIILK
RNFVEGSDVKAGTSLYQIDPATYQAQYNNAKAALVQAQANAEIAQLTVNRYKPLLGTNYV
SKQDYDQAVATARQTEAAVAAAKASLDNAQISLNYTRVTAPITGRVGKSTVTEGALVSNA
QATAMTTIQQLDPIYVDVTQSTNDFLRLKKELESGTLQQTNGKANVQLTLDSGTRYSQAG
TLEFSDVTVDETTGSITLRAVFPNPDHNLLPGMFVRAQLDSGVTPNAILVPQQGVSRTPR
GDATVMLVGEGDKVEVHSITTGQAIGDKWLVTSGVKSGDRIILTGLQKIRPGMQVKAQEA
AAGNAQQQQPQSQPAKS
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtgctcacaggatgtgacaacaaggcgtctcagggaggggcccaacaaggtggcgcaccg
gaagtcggcatcattacgataaaatcacaaactctgaatatcatcaccgagttgccggga
cgcacaagcgcctaccgtattgccgaagtacgccctcaggtgaacggtattattctgaag
cgcaactttgtggaaggcagcgacgtcaaagcgggcacatcgttgtaccagattgatccg
gccacgtatcaggcccagtacaacaacgccaaagccgcactggtccaggcgcaggccaac
gctgaaatcgcgcagttgaccgtcaaccgctacaagccgctgctcggcaccaactacgtc
agcaagcaggattacgatcaggccgtggccaccgcacgccagactgaggcggctgtcgcc
gcggctaaagccagcctcgacaacgcccagattagcctgaactacactcgcgtaacggct
ccgattaccggccgtgtcggtaaatccaccgtgacggaaggtgcgctggtgtccaacgcg
caggcgacagcgatgaccactatccagcagttggatccgatctatgtggacgtcacccag
tccaccaacgatttcctgcgcctgaaaaaggaactggaaagcggcaccctgcaacaaacc
aatggcaaggccaacgtccaactgacgctggatagcggcactcgctatagccaggctggg
acgctggaattctccgatgtcaccgtggatgaaaccaccggttccatcacgctacgcgcc
gtgttccctaacccggatcacaacctgctgccggggatgtttgtccgcgcgcagttggat
tccggcgtcacgcccaacgcaattctggtgcctcagcagggcgtgagccgcacaccgcgt
ggtgacgctaccgtgatgctggtcggcgaaggcgataaggtggaagtccattcgataacc
accggccaagccatcggcgacaaatggctggtaacgtcgggcgttaagtcgggtgaccgt
atcatcttgacaggcctgcaaaaaatcagaccgggcatgcaggtaaaagcgcaggaagcg
gccgctggtaatgcgcaacagcagcaaccgcagtcccaacccgctaagtcttaa
DBGET
integrated database retrieval system
