Dickeya dianthicola: DDI_2666
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Entry
DDI_2666 CDS
T05141
Name
(GenBank) RND efflux system, inner membrane transporte CmeB
KO
K18138
multidrug efflux pump
Organism
ddq
Dickeya dianthicola
Pathway
ddq01501
beta-Lactam resistance
ddq01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DDI_2666
01503 Cationic antimicrobial peptide (CAMP) resistance
DDI_2666
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ddq02000
]
DDI_2666
01504 Antimicrobial resistance genes [BR:
ddq01504
]
DDI_2666
Transporters [BR:
ddq02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
DDI_2666
Antimicrobial resistance genes [BR:
ddq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DDI_2666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Big_1
Motif
Other DBs
NCBI-ProteinID:
ATO33834
LinkDB
All DBs
Position
complement(2759403..2762564)
Genome browser
AA seq
1053 aa
AA seq
DB search
MFSRFFIHRPVFAWVIAIVIMLAGALSIESLPVAQYPNVAPPSIAIKAGYPGASADTLEN
SVTQVIEQQLTGLDGLLYFSSSSDSSGDVRITATFTQGTNPDTAQVQVQNKVQQATSRLP
TEVQQQGITVTKSQQDFLLIMALYDTTDKSTAADIADYMVSNLQDPLSRVEGVGSVQVFG
SQYAMRIWLDPIKLAAYSLMPSDISSAIEAQNTQVSAGKIGAQPVGGDQQLTATVTAQSR
LKTPAQFRDIIVKSESSGAMVRLGDVARVELGNEDYTTATRLNGHPAGGIAVMLSSGANA
LATAERVKAKVAEFTPQMPQGYEVSYPKDSTDFIKVSVEEVVYTLFEAIALVVLVMFLFL
QNLRATLIPAVAVPVVLLGTFGVLAVFGYSINTLTLFGMVLAIGLLVDDAIVVVENVERL
MRDQGLSPVAATEQSMREISSALVGVALVLSAVFLPMAFFGGSTGVIYRQFSITIVSSML
LSVVVALTLTPALCAALLKPVAHAPSNGNGFFARFNRGYENLQQRYTGRVAHVITGPWRY
LGLYGLLIVVMGVLFLRLPGGFLPNEDQGDVMVQFTLPAGATETRTSKVGERIEHYFLSE
EKDNVEAIFVISGFNFSGSGQNAGMAFVALKNWSLRPGSANSSTAIARRAMQALSAIRDA
QVFTMSPPAVQGLGQSDGFTFELQATGNTDRSRLLALRDQLLAEAAKNPRLAAVRPNDLV
QMPQLQVDLDYAKIRALGLSISDVTSTLSSAWGGTYVNDFIDRGRVKKVYIQGDAGSRGQ
PSDLDKWFVRGADSSGNSVMTPFSAFAATRWSYGPESLSRYNGLASYELQGTGAPGVSSG
KAMDEMEALARALPAGTTFAWSELSYQERLASGQAISLYAMSILVVFLCLAALYESWSIP
FSVMMVIPLGVVGAVLAATVRGLENDVYFQVALLTTIGLSAKNAILIVEFAEAAYRRGAT
LYEAALEGARTRLRPVLMTSMAFIAGVFPLAVATGAGANSRISIGSGIVGGTLTATVLAI
FLVPMFFVLVRRVFPGRHTHTLPSTSTPTQGEN
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgttctcccgtttcttcattcatcgcccggtgttcgcctgggttatcgccattgtcatc
atgttggcgggcgcgctgtcgattgaatcgctgccggtggcgcagtacccgaatgtggcg
ccgccctccatcgccatcaaagccggctaccccggcgcttccgccgatacgctggaaaac
agcgtgacccaggtgattgagcagcaactcaccgggttggacgggctactctatttttcg
tcatccagcgattcgagcggcgatgtgcgcatcaccgccacgtttacgcagggcaccaat
ccggataccgcgcaggtgcaggtgcagaacaaggtgcaacaagccaccagccgcctgccc
actgaagtgcaacagcaaggcatcacggtgaccaagtcccagcaggatttcctgctgatc
atggcgttatacgacaccaccgataaaagcaccgccgccgacatcgccgactatatggtc
agcaacctgcaggacccgctctccagggtggaaggcgtcggcagtgtacaggtgttcggt
tcccagtacgcgatgcgcatctggctggacccgatcaaactggcggcgtatagcctgatg
ccatccgatatttcctccgcgatcgaagcgcagaacactcaggtgtcggccgggaaaatc
ggcgcgcagcccgtcggcggcgatcagcaattgaccgccaccgtcaccgcgcaatcgcgg
ctgaaaaccccggcgcagttccgcgacatcatcgtcaaaagcgaatccagcggcgcgatg
gtgcgccttggcgacgtggcgcgggtcgaactgggcaacgaggattacaccactgccacc
cggctgaacggtcatccggccggcggtattgcggtgatgctgtcgtccggcgccaatgcg
ctggcgacggcggagcgggtgaaggccaaggtggcggaattcaccccgcagatgccgcaa
ggctatgaagtgtcctacccgaaagacagcaccgactttatcaaggtgtcggtggaagag
gtggtgtacaccctgtttgaggccatcgcgctggtggtgctggtgatgtttctgtttctg
cagaacctgcgcgccacgctgatcccggcggtggcggtgccggtcgtgttgctgggcacc
ttcggcgtgctggcggtgttcgggtactccatcaataccctgacgctgttcggcatggtg
ctggcgatcggcctgctggtggatgacgccatcgtggtggtggaaaacgtcgagcggctg
atgcgcgaccagggactgtcgccggtggcggctacggaacagtcgatgcgcgagatttcc
agcgcgctggtgggggtggcgctggtgctgagcgcggtatttctgccgatggcgtttttt
ggcggctcgaccggggtgatttaccggcagttctccatcaccatcgtgtcctccatgctg
ttgtcggtggtggtggcgttgacgttgacgccggcgctatgcgcggcgcttctgaaaccg
gtggcgcatgcgccgtcgaacggcaacggctttttcgcccgcttcaaccggggctatgaa
aacttacagcagcgctataccgggcgggtggcgcacgtcatcaccggcccgtggcgttat
ctggggttgtacggattgttgattgtggtgatgggcgtgctgttcctgcggttgccgggc
ggctttctgcctaacgaggatcagggcgacgtgatggtgcagtttacgctgccggccggc
gccaccgaaacccgcaccagcaaggtcggggagcgcatcgaacactattttctcagcgaa
gagaaagacaatgtcgaggccattttcgtgatttccggcttcaacttcagcggcagcggg
caaaatgccgggatggcgttcgtggcgctgaagaactggagcctgcgccccggcagtgcg
aacagttccaccgctatcgcccggcgcgccatgcaggcgttgtccgccattcgcgatgcc
caagtgttcaccatgtcgccgccggcggtgcaggggctgggccagtccgacggttttacc
tttgaattgcaggctaccggcaataccgaccgcagtcgtttgctggcgctgcgcgatcaa
ctgctggcggaggcggcgaaaaatccgcggctggcggcggtgcgccccaacgatctggta
cagatgccgcagctacaggtggacctcgactacgccaaaatccgcgcgctggggctgtcg
atcagcgatgtcaccagcacgttgagcagcgcctggggcggcacctacgtcaacgacttc
atcgatcgcggccgggtgaaaaaagtctatatacagggcgacgccggctcgcgcggccag
ccgtcggatctcgacaagtggttcgtgcgcggcgccgacagcagcggcaacagcgtgatg
acgccgttctccgcctttgccgccacccgctggagctacggcccggaaagcctgtcgcgt
tacaacgggctggcgtcttacgaacttcagggcaccggcgcgcccggcgtcagctccggc
aaggcgatggacgaaatggaagcgctggcgcgcgcgctgccggccggcaccacctttgcc
tggagcgagctgtcctatcaggagcggctggccagcgggcaggcgatatcgctctacgcc
atgtcgattctggtggtgttcctgtgcctggcggcgctgtatgaaagctggagcatcccc
ttctcggtgatgatggtgatcccgctcggggtggtgggcgcggtgctggccgcgacagtg
cgcgggctggaaaacgatgtctatttccaggtggcgttgctcaccaccatcggcctgtcg
gccaagaacgccattctgatcgtggaattcgccgaagccgcttaccggcgcggcgctacg
ctgtatgaagcggcgctggaaggggcgcgtacccgcctgcggccggtgttgatgacgtcg
atggcgtttatcgccggggtattcccgctggcggtggcgaccggcgcgggcgccaacagc
cgtatctccatcggcagcggcattgtcggcggtacgctgaccgccaccgtgctggcgatt
tttctggtgccgatgttctttgtgctggtcaggcgggtattccccggtcgtcacacgcac
acattgccgtcaacgtcgacgcctacgcagggagaaaactga
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