Desulfovibrio desulfuricans ATCC 27774: Ddes_1108
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Entry
Ddes_1108 CDS
T00837
Name
(GenBank) UDP-N-acetylmuramyl-tripeptide synthetase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
dds
Desulfovibrio desulfuricans ATCC 27774
Pathway
dds00300
Lysine biosynthesis
dds00550
Peptidoglycan biosynthesis
dds01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dds00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Ddes_1108
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Ddes_1108
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dds01011
]
Ddes_1108
Enzymes [BR:
dds01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Ddes_1108
Peptidoglycan biosynthesis and degradation proteins [BR:
dds01011
]
Precursor biosynthesis
Amino acid ligase
Ddes_1108
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
ACL49013
UniProt:
B8IZT6
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All DBs
Position
1300088..1301542
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AA seq
484 aa
AA seq
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MNREFAALLDECGRGEIEVRADSRQVCPGDIFVAVPGVREDGAQFIPAAAEAGAGVIVCR
ADSEEAAAAATAGCRVVHHADPREALWRLAQARWHTDTLPIRIVGVTGTNGKTTCTYLLE
RLFAQAGHKLGVMGTVSYRWPGHVEAAPLTTPDALSVHAMLAAMARDGVDVAVMEVSSHA
IDQQRVCGVPFSGAAFTNLSQDHLDYHRDMESYFQAKARLFLELPRADKSMAVNADDAWG
RRLLELCPTALSFGLQKGAPNRRHLWGELLSSTTAGCHLRMSLEDMQWELRSPLVGAFNA
SNLLAVQAVALEMGIDPEAFKALESFTGVSGRLERVENPQGLNVFVDYAHTPDALENVLK
ALRDAGFERVITVFGCGGNRDRSKRPIMGEAVARWSDVAVLTSDNPRFEDPEAILKDVLP
GLADAKEVVVEVDRREATTRALGMLGKKDALLIAGKGHEDYQIIQGVKHHYSDQEVVREI
LRCA
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgggaatttgcggcactgctggatgagtgcggacgcggcgagattgaagtgcgc
gcagactcgcgtcaggtatgtcccggcgatatttttgtggctgtacctggcgtcagggaa
gacggcgcccagtttatccctgctgccgctgaagccggggcgggagtcattgtttgccgg
gccgacagtgaagaggctgcagctgcagcgaccgccgggtgcagggtcgtccaccatgcc
gatccgcgtgaggcgctctggcggctggcacaggcccgctggcatacagataccttgcct
atccgtattgtgggtgttacaggcaccaacggcaaaaccacctgcacctatctgcttgaa
cgccttttcgcccaggcagggcataagctcggcgtgatgggaacagtgagctatcgctgg
cccggccatgttgaggcggcccccctgaccactcctgatgccttgagcgtgcatgccatg
ctggccgcaatggcccgcgatggcgtggacgtggccgtgatggaagtctcctctcatgcc
atagaccagcagcgggtgtgcggtgtgccgttttccggcgcggccttcaccaacctgagc
caggatcatctcgattatcatcgggatatggaaagttattttcaggccaaggccaggctt
tttcttgagctgccgcgcgccgacaaatccatggccgtcaatgctgacgatgcctggggc
cggcgcctgctggagctgtgtcccacggctctttccttcggtctgcaaaagggtgcgccc
aacaggcggcacctgtggggagagctgctttcttccaccacagcaggctgtcatctgcgt
atgagccttgaagacatgcagtgggagctacgctctccccttgtgggggctttcaatgct
tccaacctgctggctgtgcaggctgtggctctggaaatgggaattgatcctgaagccttc
aaggctcttgaaagctttacgggggtcagcggcaggctggagcgggtggaaaatccgcaa
ggactcaatgtttttgtggattatgcccatactcccgatgcacttgagaatgttctcaag
gccctgcgcgatgcaggctttgaacgcgtgatcactgtttttggctgtggcggtaaccgt
gaccgcagcaagagacccatcatgggagaagctgtggcccgctggtcggacgtggccgtg
ctgacctcggacaatccgcggtttgaagatccggaggccatactcaaggatgtgttgcct
ggccttgcagatgccaaagaggttgtcgtcgaggttgaccgtcgcgaggccaccacccgg
gctttgggcatgcttggcaaaaaagatgcgttgcttattgccggcaaagggcatgaagac
taccagattattcagggggttaaacaccattacagcgatcaggaagtggtgcgggagata
ctccggtgcgcataa
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