Dechloromonas sp. TW-R-39-2: GBK02_02020
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Entry
GBK02_02020 CDS
T08942
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
dech
Dechloromonas sp. TW-R-39-2
Pathway
dech00270
Cysteine and methionine metabolism
dech00450
Selenocompound metabolism
dech00670
One carbon pool by folate
dech01100
Metabolic pathways
dech01110
Biosynthesis of secondary metabolites
dech01230
Biosynthesis of amino acids
dech04980
Cobalamin transport and metabolism
dech04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
dech00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
GBK02_02020 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
GBK02_02020 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GBK02_02020 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
GBK02_02020 (metH)
04980 Cobalamin transport and metabolism
GBK02_02020 (metH)
Enzymes [BR:
dech01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
GBK02_02020 (metH)
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Paralog
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
CdhD
DUF5810
Motif
Other DBs
NCBI-ProteinID:
QRM20922
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Position
complement(417085..420747)
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AA seq
1220 aa
AA seq
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MQSDRTAELSALLQQRLLVLDGAMGTMIQRHGLQEADYRGTRFANHPHDLKGNNDLLVLT
RPDVIGGIHREYLEAGADILETCTFNSTAVSQADYKLEAIVYELNFEGAALARRLCDEFT
AANPAKPRFVAGVLGPTSRTASISPDVNDPGYRNVTFDALVTDYLEAIRGLVEGGADILL
VETVFDTLNAKAALFAIEQFFDNAGRRWPVMISGTITDASGRTLSGQTAEAFWNSLNHVK
PLSFGLNCALGANELRQYVEELSRVCDCFVSAHPNAGLPNAFGGYDETPEMLADEIESWA
KTGIVNIVGGCCGTSPDHIRVIAQRVAAVNPRKVPEIEKKLRLSGLEPFNVGADSLYVNV
GERTNVTGSKAFARMILEGRFDDALAVARQQVENGAQVIDINMDEAMLDSLAAMDKFLKL
IASEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGEAKFLEQAKLARRYGAA
VIVMAFDEKGQADTFARKTEISKRAYELLLSIGFPAEDIIFDPNIFAIATGIPEHDNYAV
DFIESVRWIKQNLPHAHISGGVSNVSFSFRGNDPVREAIHTVFLYHAIQNGMTMGIVNAG
MLGVYDDLEPVLREKVEDVVLNRNPGAGEALVDFAQTVKEGKAKDSGPDLSWREQSVEKR
LEHALIKGITDFVVADTEEVRAQLEARGKPPLAVIEGPLMAGMNHVGDLFGAGKMFLPQV
VKSARVMKQAVAHLLPYIEAEKTRTGLGSKGKILMATVKGDVHDIGKNIVGVVLGCNGYD
VVDLGVMVSCDNILKAALEHRVDIIGLSGLITPSLEEMAHVASEMQRLNMKQPLLIGGAT
TSRAHTAIKIAPNTEGAVVYVPDASRAVGVATKLLSTEQRDGYMAEIVAEYETVRAEHAG
RKGATMVTLAEARANRFTWNEIHTPVTPKQPGRHSLNIDLDKLVPYIDWSPFFQSWDLAG
RYPAILQNELVGETARQLFADAQAMLGKIVAERWLTAKAVFGLYPARGENEDIVLYTDES
RSEELARWVGLRQQHKQPKGRFNVALADFVGQNDYTGAFAVTAGLGIDEHVAAFEKANDD
YSAIMLKSLADRLAEAAAEWLHAEVRTHYWGYSTDEKLDNDALINEQYQGIRPAPGYPAC
PDHTAKRTLFALLDAPANAGMQLTESCAMTPAAAVSGFYIGHPAASYFAIPKIGRDQLDD
WTERKGMTQKDAEYWLAPLL
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccgaccgtaccgccgaactatccgccctgctccagcaacgcctgctcgtcctc
gacggcgccatgggcaccatgatccagcgccacgggttgcaggaagccgactaccgcggc
acgaggtttgccaatcacccgcacgacctcaaaggcaacaacgacctgctggtcctcacc
cgaccggacgtgatcggagggatccaccgcgaataccttgaagctggcgccgacattctc
gaaacctgcaccttcaattcgaccgccgtctcgcaagccgactacaagcttgaagccatc
gtctacgaactgaatttcgaaggtgccgcactggcccgccgcctgtgcgacgaattcacc
gctgccaatccagccaagccgcgcttcgtcgccggcgtgctcggcccgaccagccgcacc
gcctcgatttcgccggacgtgaatgatccgggctaccgcaacgtgactttcgacgcgctg
gtcaccgactacctcgaagcgatcaggggcttggttgagggcggcgccgacatcctgctc
gtcgaaaccgtgttcgatacgctaaacgccaaggcggcactgttcgccatcgaacaattc
ttcgataacgccggccgtcgctggccagtgatgatttccggcacgattaccgacgcctcc
ggccgcaccctctccggccagaccgccgaggctttctggaattcgctgaaccacgtcaag
ccactctccttcggcctgaactgcgccctcggtgccaacgaactgcgccagtacgtcgag
gaactgtcgcgcgtctgcgattgcttcgtctcggcccaccccaacgccggcctgccaaac
gccttcggcggctacgacgaaacacccgaaatgttggccgacgaaatcgaaagctgggcc
aagaccggcatcgtcaatatcgtcggcggttgctgcggcacctcaccggatcacattcgt
gtcattgctcaacgggtcgctgcggtcaacccgcgaaaagtgccggaaatcgagaagaaa
ctgcgtctttccggccttgaaccgttcaatgtcggcgccgattcgctgtacgtgaacgtc
ggcgagcggaccaacgtcaccggctcgaaagccttcgcccgcatgatcctcgaaggccgc
ttcgacgatgcgctggccgtcgcccgccagcaggtcgagaacggcgcccaggtcatcgac
atcaatatggacgaggcgatgctcgactcgctcgccgcgatggacaagttcctcaagctg
atcgcttcggaaccggatatttcccgtgtgccgatcatgatcgactcgtcgaagtgggaa
gttatcgaggccggcctcaagtgcatccagggcaagggcatcgtcaattcgatctcgatg
aaggaaggcgaagccaagttcctcgaacaagccaagctggcccgccgctacggcgccgcg
gtgatcgtcatggccttcgacgaaaagggccaggccgacacctttgcccgcaagaccgag
atttccaagcgtgcttacgagctgttgctgagcatcggtttcccggccgaagacatcatc
ttcgacccgaacatctttgccatcgccaccggcattcccgaacacgacaattacgccgtc
gatttcatcgaatccgtccgctggatcaagcagaacctgccgcacgcccacatttcgggt
ggtgtttccaacgtctccttcagcttccgcggcaacgatccggtgcgtgaagcgatccac
accgttttcctctaccacgccatccagaacggcatgaccatgggcatcgtcaatgccggc
atgctcggtgtttacgatgatctggaaccggtgctgcgcgagaaggttgaagatgtcgta
ctcaaccgcaatccaggcgccggtgaagcactggtcgatttcgcccagacggtgaaagaa
ggcaaggccaaggatagcggtccggatttgtcgtggcgcgaacagtcggttgagaagcgc
ctggaacacgcgctgatcaagggcattaccgatttcgtcgtggccgataccgaagaagtg
cgtgcccagttggaagcccggggcaagccgccgctcgccgtcatcgaaggcccgctgatg
gccggcatgaaccacgtcggcgaccttttcggcgccggcaagatgttcctgccgcaagtc
gtcaaatcggcccgcgtcatgaaacaggcggtcgcccacctgctgccctacatcgaagcg
gaaaagacccgtaccggcctgggcagcaagggcaagatcctgatggccacggtcaagggc
gacgtgcacgacatcggcaagaacatcgtcggcgtcgtgctcggttgcaacggctacgat
gtcgtcgatttgggcgtcatggtttcctgcgacaacatcctgaaagccgcgctggagcat
cgcgtcgacatcatcggcctgtccggcctgatcaccccgtcgctggaagaaatggcccac
gtcgccagcgaaatgcaacgcctgaacatgaagcagccgctgttgatcggcggcgcgacg
accagccgcgcccacaccgcaatcaagatcgcccccaacaccgaaggcgccgtggtctac
gtgccggacgcttcacgcgccgttggcgtcgccaccaaactgctgtccaccgaacagcgc
gacggctacatggccgaaatcgtcgccgaatacgagaccgtgcgtgccgaacacgccggc
cgcaagggtgcgacgatggtcacgctggccgaagcccgggccaaccgtttcacgtggaac
gagattcataccccggttactccgaagcagccgggccgtcattcgctgaacatcgatctc
gacaaactggtgccgtatatcgattggtcgcccttcttccaaagctgggatctggcgggt
cgctatccggccattctgcagaacgagcttgtcggtgaaacggctcgccagctttttgcc
gatgcccaagccatgctgggcaaaatcgtcgccgaacggtggttgaccgcaaaagccgtg
ttcggcctctatccggcacgtggcgagaatgaggacatcgtgctctacaccgatgaatca
cgcagcgaagaactggcgcgctgggtcggtttgcgccagcaacacaagcagccgaagggc
cgtttcaatgtcgcgctggccgatttcgtcggccaaaacgactataccggcgcctttgcc
gtgacggcaggcctggggatcgacgaacacgtcgcggcgttcgaaaaagccaacgacgac
tattcggcaatcatgctcaaatctctcgccgaccgcctggccgaagccgctgctgaatgg
ctccatgcggaagtacgcactcactactggggctactcgacggatgaaaagctggataac
gatgcgctgatcaacgagcaataccagggcatccgcccggcccccggttatccggcctgc
ccggatcacacagccaagcgcaccctgtttgccttgctcgacgcacccgccaacgccggc
atgcagctcaccgaatcctgcgcgatgacgcctgcagcggccgtttccggcttctacatc
ggacacccggcagccagctactttgccattccgaaaatcggccgtgaccagctcgacgat
tggactgagcgcaaaggcatgacgcagaaggatgccgaatactggctggcacccctgctt
tga
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