Dechloromonas sp. TW-R-39-2: GBK02_12885
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Entry
GBK02_12885 CDS
T08942
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
dech
Dechloromonas sp. TW-R-39-2
Pathway
dech03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dech00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GBK02_12885 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dech03400
]
GBK02_12885 (nth)
Enzymes [BR:
dech01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GBK02_12885 (nth)
DNA repair and recombination proteins [BR:
dech03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GBK02_12885 (nth)
Prokaryotic type
GBK02_12885 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QRM20227
UniProt:
A0A974Y8I6
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All DBs
Position
2670834..2671466
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AA seq
210 aa
AA seq
DB search
MKKADIEQFYARLRAANPAPTTELNYTTPFQLLIAVILSAQATDVGVNKATDRLFPVAPT
PDKMYALGVEGLSEYIKTIGLYRTKAKNVIATCRMLLDLHDGQVPDERSALEALPGVGRK
TANVVLNTAFGQPTIAVDTHIFRLGNRTGIAPGKTVVDVEQKLLRVTPDEYMKDAHHWLI
LHGRYVCKARKPECERCIVADLCRFKGKTL
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaagccgatattgagcagttctatgcccgtttgcgtgcggccaatcccgcaccg
acgaccgaactgaactacacaacaccgtttcaattgctgatagccgtcattctctcggct
caggcaacggatgtgggcgtcaacaaagcgaccgaccgacttttcccggtcgccccgacc
cctgacaagatgtatgcgctgggcgtcgaaggcctgagcgaatacatcaagaccatcggg
ctgtatcggaccaaggcaaaaaacgtcatcgccacctgccggatgctgcttgacctgcat
gacggtcaggtgcccgatgaacgcagcgcactcgaagccctgcccggtgtcggccgaaag
acggccaatgtcgtactcaacacagcctttggccagccgacgatcgccgtcgacacgcac
atcttccggctcggcaaccggaccggcatcgctccgggaaaaactgtggtcgatgtcgag
caaaaactgctccgcgtcacacccgatgaatacatgaaggatgcccatcactggctcatt
ctccatggtcgttatgtgtgcaaggcacgcaagccggaatgcgaacgctgtatcgtggct
gatctctgccgcttcaagggaaaaacattgtga
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