Dechloromonas sp. TW-R-39-2: GBK02_15510
Help
Entry
GBK02_15510 CDS
T08942
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
dech
Dechloromonas sp. TW-R-39-2
Pathway
dech00300
Lysine biosynthesis
dech00550
Peptidoglycan biosynthesis
dech01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dech00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GBK02_15510
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GBK02_15510
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dech01011
]
GBK02_15510
Enzymes [BR:
dech01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
GBK02_15510
Peptidoglycan biosynthesis and degradation proteins [BR:
dech01011
]
Precursor biosynthesis
Amino acid ligase
GBK02_15510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QRM20687
UniProt:
A0A974SYK1
LinkDB
All DBs
Position
complement(3212288..3213769)
Genome browser
AA seq
493 aa
AA seq
DB search
MSTPREILDRLEALGVVPRGVADDSRQVMPGDVFLAYPGDLADGRRYIDNAIERGAVAVV
WQPGDGFAWNPALTVANLAVDALRPLAGPLAHAVYGHPSEGLSLIAITGTNGKTTISQFV
ARAYAKPCAVIGTLGAGFPGALVETGFTTPEATTLMRYLADFREQRAAACALEASSIGIE
EGRMNGARVDIAIFTNFTRDHLDYHGSMEAYAAAKAKLFAWPRLRTAIINLDDELGLKLV
RETTAMRVLGYAIGEAKRDFPALVRAEELVETPFGQRFMLVLPNGRAVVDTALVGRYNVS
NLLAVAAVLHDGGMQAGEVARRIAELTPPPGRMERIGGHGEPLVVVDYAHTPDALENALG
ALRSVADARGGRLVVVFGCGGDRDKGKRPQMGGVAEQRADHALVTSDNPRSEAPLAIIDD
VLSGMTGADVEVDRAAAIRRAILAADQRDVILLAGKGHETYQEVAGVRTPFSDVEQAQAA
LALRHTISQEVSA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
gtgagtacgccgcgtgaaattcttgatcgtctggaggccttgggcgttgtgccccgtggc
gttgccgacgatagccgccaggtgatgccgggcgatgtcttcctggcctatccgggcgat
ctggccgatggtcgtcgttatatcgacaacgctattgagcgcggtgctgttgccgtcgtt
tggcagccgggcgacggttttgcctggaatccggcgttgaccgtggcaaaccttgccgtc
gatgccttgcgcccgctggctgggccgttggcgcacgctgtttatggacatccgagcgaa
ggtttgtcgctgattgcgattaccgggaccaacggcaagacaacgatcagccagttcgtc
gcacgggcttacgccaagccttgcgccgtgatcggtaccttgggcgccgggtttccgggg
gcgttggttgaaaccgggttcacgacgccggaagcaacgaccttgatgcgctacctggcc
gatttccgcgaacagcgcgcggccgcttgtgcgctcgaagccagttcgatcggtatcgaa
gaagggcggatgaacggtgcgcgcgtcgatatcgcgattttcaccaatttcacccgtgat
cacctcgactaccacggcagcatggaagcttatgccgcagccaaagccaagcttttcgcc
tggccgcgcctgcgcacggcgatcatcaacctcgatgacgagcttggtttgaagctggtc
cgtgaaacgacggcaatgcgggtgcttggttacgccattggcgaagccaaacgcgatttt
ccagcgctggttcgggcagaagagctggttgaaacgccgtttggccagcgcttcatgctg
gttttgccgaacggtcgggcggtcgttgatacggccttggtcgggcgttacaacgtttca
aacctgctcgccgtggccgccgtgttgcacgacggcggcatgcaggccggtgaagtggca
cgccgtatcgccgaactgacgccgccgccgggacgcatggagcggatcggtggccatggc
gagccgctggttgtcgtcgattacgcgcatacaccggatgcgctggaaaatgcactgggt
gccttgcgctcggtggccgacgcgcgtggcggacgtctggtcgtggtttttggctgtggc
ggtgatcgcgataaaggcaagcgtccgcaaatgggcggcgttgccgaacagcgtgccgac
catgccctggtcaccagcgacaacccgcgcagtgaagcaccgctggcgatcatcgatgat
gtgctgtccggcatgactggtgccgacgttgaagtcgaccgggccgcggccatccgtcgc
gccattctcgcagccgatcagcgcgatgtgatcctgctggccggtaaaggccacgagacc
tatcaggaagttgccggtgtgcggacgccgttttcggatgtcgaacaggctcaggcagcc
ctcgcgctgcgtcataccatttcccaggaggtgagcgcatga
DBGET
integrated database retrieval system
