Deinococcus sp. AJ005: DAAJ005_00605
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Entry
DAAJ005_00605 CDS
T06226
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
dein
Deinococcus sp. AJ005
Pathway
dein01501
beta-Lactam resistance
dein01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dein00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DAAJ005_00605
01503 Cationic antimicrobial peptide (CAMP) resistance
DAAJ005_00605
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dein02000
]
DAAJ005_00605
01504 Antimicrobial resistance genes [BR:
dein01504
]
DAAJ005_00605
Transporters [BR:
dein02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
DAAJ005_00605
Antimicrobial resistance genes [BR:
dein01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DAAJ005_00605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Spore_YhcN_YlaJ
Motif
Other DBs
NCBI-ProteinID:
QFP75099
UniProt:
A0A5J6YQI5
LinkDB
All DBs
Position
p380k:complement(40909..44328)
Genome browser
AA seq
1139 aa
AA seq
DB search
MSTHESGDLNAPRGTLPDGTPEPVINPFVRFSVRNYVFSIGIFVLVALLGLVSVFRLGVE
LLPNFEVPILAVSTTYAGANPDQVDREVSRRIEDAVSTLAGVVDINTTSVSNQSAVVITF
ADSTDIDSAANSVSQAVAAIRGSLPNGADAPVVQKFDPNATPILSLALLGGSAKPDDVTS
YAEDTLVPRLERVEGVADVRLSGGPERKIQVLLDPTRLQSYNLTPARVTGAISGSALDLP
AGTLTQGGNTTGFSTRNTPRSAADVGRIIVDPANGLRVADVASVRDGSASPTSFARVNGQ
PAVLLSVRKASGTNSVAVTDNVLAAMKAQPLPQGYSLKLANDTTRETRATVSDTFKEFLI
AVAAVGLICLLFLGRLNTVFSVILAIPISISAAPLLFGLLGFTFNIISLLAIIVAIGIVV
DDSIVVAENVQRYRDMGYGQVRSVLLGASEVFSAVTAASFSLLAVLIPLSFFPGILGQFF
SQFGLGIAAAITLSWLESLLFLTVRLAYTAEARSVSWAELPPIVARLPELFRRTLAGVKT
VPGVLALILGGTVTGLALSGTGLPLPVKLILAALLAPVVWTLVRYVVTVLYAFLEALTGT
LHGVTIKGVTGVARAYARSLGNALKRPWIVMLVALAFMGSVVLIAPKLGFAFVPQTDSGI
LNVDLTLPVGTDLATTNAVTRQIEDRLLARKEVRLVQTSVGSGSLVGGNSANASSLTLTL
IPKEERQGLDLLSAEYRTLLAPVVANRPGAELTVASQQTGPGGSADMTLALTAPNQALLL
ERNREVVRLLRKDPNIRTVKSSLSATTQERTFIPDPNRLSGTGLSASDVAQALRTYNDGS
VAGSVRDGDQSVDIVVRLDPSLIRDEQSLLSQTVYSPALNANLPLSGLGTFQVAQAPATL
SRLNKAYTATLDINLKQGGPNPFAYQAVLEKRVGDAGLLKDSVTLGNASAFGSSGLTGDL
VFFGPIIMISSILLTYLVLGSQFNSFRYPIYLLLPVPIAIVGALWTLGLFGVNLDVITVL
GMVVLLGLSTKNSILYLEFVTERARSLPLREALIEAAELRFRPILMTTLTVLVISIPLIL
GQGDGAEFRRGLGIVILGGVVTSTLLTFYVVPTVFWQFERRRLKPDAPVQMGGTPVPGD
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgagtacccacgaatccggtgacctgaatgctccacgcggcacgctgcccgacggcacg
ccggagccggtgatcaaccccttcgtgcgcttcagcgtccgcaactatgtcttttccatc
ggcattttcgtgctggtggcgctgctggggctggtctcggtgttccggctgggcgtggaa
ctgctgcccaatttcgaggtgccaatcctggcggtcagcaccacctacgcgggcgcgaac
cccgatcaggtggaccgcgaggtcagccgccgcatcgaggacgcggtcagcaccctggcc
ggagtggtggacatcaacaccacctccgtgagcaaccagtcggcggttgttatcaccttt
gccgacagcaccgacatcgactcggcagccaacagcgtgtcgcaggcggtggccgccatc
cggggttccctgcccaacggcgcggacgccccggtggttcagaaattcgatcccaacgcc
accccgatcctgtcgctggccctgctgggtggcagcgccaaacccgacgacgtgacttcc
tacgccgaggacaccctggtgccccggctggaacgcgttgagggcgtggccgacgtgcgg
ctgtcgggtgggccggaacgcaagatccaggtgctgctggaccccacccgcctgcaaagc
tacaacctgacgcccgcgcgcgtcaccggggccatcagcggctcggcgctggacctgccc
gccggtacgctgacgcagggtggcaacaccacgggatttagcacccgcaacaccccgcgc
agcgccgctgatgtgggccgcatcatcgtcgatccggccaacgggctgcgggtggcggac
gtggccagcgtgcgtgacggcagcgcctcacctacctcattcgcgcgggtcaacggtcag
cctgccgtgctgctctcggtgcgaaaggcctcgggaaccaattctgtggccgtgaccgac
aacgtgctggccgccatgaaagcccagccgctgccccagggatacagcctcaagctggcc
aacgacaccacccgtgagacgcgcgccaccgtttcggacaccttcaaggaattcttgatc
gcggtggccgccgtgggcctgatctgcctgctgttcctgggccgcctgaacaccgtgttt
tcggtgatcctggcgattccgatctcgatcagcgctgcgcccctgctgttcgggctgctg
ggcttcaccttcaacatcatctcgctgctggcgatcatcgtggccatcggcatcgtggtg
gacgattccatcgtggtggccgagaacgtgcagcgttaccgcgacatgggctacggccag
gtccgcagcgtgctgctgggggccagcgaggtcttctcagcggtgaccgccgcgtcgttc
tcgctgctggccgtgctgatcccgctgagcttcttccccggcatcctgggccagttcttc
agccagttcgggctgggcatcgccgccgccattacgctgtcgtggctggaaagcctgctg
ttcctgaccgtgcggctggcctacaccgccgaggcccgcagcgtgagctgggccgagctg
ccccccatcgtggcccgcctgcccgagctgttccggcgcacgctggccggagtcaaaaca
gtgcccggcgtcctggccctgatcctgggcggcacggtcacggggctggccctctcgggc
acgggcctccccctgcccgtcaaattgatcctggccgccctgctggcccccgtcgtctgg
acgctggtgcgctatgtcgtcaccgtgctgtacgccttcctggaagcgctgaccggcacc
ctgcacggcgtcaccatcaaaggcgtgacgggcgtggcccgcgcctatgcccgcagcctg
gggaacgccctcaagcggccctggatcgtgatgctggtggccctggccttcatgggcagc
gtcgtgctgatcgcgccgaaactgggcttcgccttcgtgccgcagaccgacagcggcatc
ctgaacgtggacctgacgctgccggtgggcaccgatctggccaccaccaacgccgtgacc
cgccagatcgaggaccgcttgctggcccgcaaggaggtccggctggtacagaccagcgtg
ggcagcggcagtctggtgggcggcaacagcgccaacgcctccagcctgaccctgaccctg
attcccaaggaggagcgccagggactggacctgctgagcgccgagtaccgcaccctgctg
gcccccgtggtggcgaaccggcccggcgcggagctgacggtggcctcccagcagaccgga
cccggcggcagcgccgacatgacgctggcactgaccgcccccaatcaggcgctgctgctg
gagcgcaaccgggaggtcgtgcgtctgctccgcaaagatcccaacatccgcacggtcaag
agcagcctgagcgccaccacccaggaacgcaccttcattcccgatcccaaccggctgtcc
ggcaccggcctgagcgccagtgacgtggcccaggcgctacggacctataacgatggctcg
gtggcgggcagcgtccgcgacggcgatcagagtgtggacatcgtggtgcggctggacccc
tcgctgatccgcgacgagcagagcctgctgtcgcagacggtctactcgcccgcgctgaac
gccaacctgcccctcagtgggctgggcacgtttcaggtggcgcaggccccggccaccctg
agccgcctgaacaaggcgtacaccgccacgctggacatcaacctcaagcagggcggcccc
aatccgttcgcctatcaggcagtgctggaaaaacgtgtgggcgacgcgggactgctgaaa
gacagcgtcaccctgggcaacgccagcgccttcggcagctcgggcctgacgggcgatctg
gtgttcttcggaccgatcatcatgatcagttcgatcctgctgacctatctggtgctgggc
agccagttcaactcgttccgctaccccatctacctgctgctgcccgtgcccatcgccatc
gtgggcgcactgtggacgctgggcctgttcggcgtgaatctggacgtgatcacggtgctg
gggatggtggtcctgctgggcctgtccaccaagaattccatcctgtatctggaattcgtg
accgagcgcgcccgcagcctgccgctgagggaggcgctgatcgaggctgccgaactgcgc
ttccgcccgattctcatgaccaccctgaccgtgttggtgatcagtattccgctgatcctg
ggccagggcgacggcgcggagttccgccggggcctgggcatcgtgatcctgggcggcgtg
gtgaccagtactttgctgactttctacgtagtgcccaccgtgttctggcagttcgagcgc
cgccgcctgaagcctgacgctcccgtgcagatgggcggcacccccgtccccggcgactga
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