Desulfoluna limicola: DSLASN_32830
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Entry
DSLASN_32830 CDS
T07859
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
dek
Desulfoluna limicola
Pathway
dek03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DSLASN_32830 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dek03400
]
DSLASN_32830 (nth)
Enzymes [BR:
dek01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DSLASN_32830 (nth)
DNA repair and recombination proteins [BR:
dek03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DSLASN_32830 (nth)
Prokaryotic type
DSLASN_32830 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
BCS97651
LinkDB
All DBs
Position
complement(4164224..4164895)
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AA seq
223 aa
AA seq
DB search
MDGKDVMALDIKIFVERLKESYKAWDAPVITLMAGIGATPFEVLIATLLSLRTKDEVTAV
AARRLFAVASTPEALLALGEEETAKLIYPVGFYPTKSKRIMEISTLILEKYQGVVPNDLD
ELLTLPGVGRKTANLVLVEGYKMEAICVDTHVHRISNRIGYVKTKDADKTEMALRKKLPR
EYWVIYNEILVAFGQVLCRPISPFCSTCPVADLCPRIGVTKHR
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggatggaaaggacgtcatggccttggatatcaagattttcgtggaacggttgaaagaa
tcctacaaagcgtgggatgccccggtgattaccctcatggccggaatcggcgcaactccc
tttgaggtgcttatcgctacccttctttccctgcgcaccaaagacgaggtgacggctgtt
gccgccaggcgtctctttgctgtggccagtacccctgaagctctccttgccctgggagaa
gaagagaccgcaaaactcatctatccggtgggtttttaccccaccaagtccaaacggatc
atggagatctccaccctgatcctggaaaaataccagggcgtcgtccccaacgacctcgat
gagctcctgaccctgcccggcgtgggccggaaaaccgccaacctcgtgctggtggaaggc
tataagatggaggccatctgcgtggacacccacgtccatcgtatcagcaatcgcatcggc
tacgtgaaaaccaaagacgcagacaaaaccgaaatggccctgcgcaaaaaactccccaga
gagtactgggttatctacaacgaaatcctcgtcgccttcggacaggtcctctgtcgtccc
atctcccctttctgctccacatgccccgttgccgacctctgccccagaatcggcgtgaca
aagcaccgttaa
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