Desulfovibrio sp. 86: DESU86_1963
Help
Entry
DESU86_1963 CDS
T11413
Name
(GenBank) Efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
delf Desulfovibrio sp. 86
Pathway
delf01501
beta-Lactam resistance
delf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
delf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DESU86_1963
01503 Cationic antimicrobial peptide (CAMP) resistance
DESU86_1963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
delf03036
]
DESU86_1963
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
delf02000
]
DESU86_1963
01504 Antimicrobial resistance genes [BR:
delf01504
]
DESU86_1963
Chromosome and associated proteins [BR:
delf03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
DESU86_1963
Transporters [BR:
delf02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
DESU86_1963
Antimicrobial resistance genes [BR:
delf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DESU86_1963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
HH_MFP_RND
RND-MFP_C
HH_EMRA
HH_YBHG
Beta-barrel_RND_2
YknX_C
BSH_CzcB
BSH_CusB
CzcB_C
Biotin_lipoyl
HH_AAEA_pHBA
SPEF2_D5
Motif
Other DBs
NCBI-ProteinID:
VZH34079
LinkDB
All DBs
Position
DESU86:2017528..2018643
Genome browser
AA seq
371 aa
AA seq
DB search
MTTRPLFSLPVILSLCLALVACNGDKDGQHDAMRLPVAVFDVVAKDEPWPAEYQAQASGS
RAVEVRARVEAIIEKRLYEEGDYVQQGQLLFQLERDRYEALMQQAQAQFTNAEREWRRVR
PLYEKNAVSQKERDNALAAYDSAKASLRQAKINLDYCQVTAPVSGYSSKENFTPGNLVGN
NSLLTYVNQTDPMYIDFSIAAPEHMLRQGMAAEGRLVTPADGRYKARLRLLDGSMYKGTG
EVTFIDSQVQPTTGVIKARAVFDNADRSIMPGQYVRLYMDGDILKDAVLVPQKCVLLTQK
GSLVMGVDKDDKVYSIPVVVGVSVGNRYLVLEGLKGGERIISEGMIKARPGSQVSIMPSG
GQQPQEGAAKK
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaagaccgctattctctcttcctgtcatactcagcctttgtcttgcactggtt
gcctgcaatggcgacaaggacggccagcacgacgccatgcgtctgcctgtcgccgttttt
gacgttgtggccaaggatgaaccctggccggcagagtatcaggcccaggcctccggttcg
cgcgctgttgaagtgcgcgctcgcgtggaagccattattgaaaaacgcctgtatgaagaa
ggcgactacgtgcagcaggggcagttgcttttccagctggagcgtgaccgctacgaagcg
ctcatgcagcaggcccaggcccagttcaccaacgccgagcgcgaatggcggcgggtgcgc
ccgctgtatgaaaaaaacgcggtgtcgcagaaagagcgtgacaatgccctggccgcctat
gacagcgccaaggcttctttgcgtcaggccaagatcaacctggactactgccaggtgacg
gcccctgtctccggctacagcagtaaggaaaacttcacgcccggcaacctcgtgggcaac
aattcgctgctcacctacgtgaaccagactgaccccatgtacatcgacttttccattgcc
gcccccgagcatatgctccgccagggcatggctgccgagggccgtcttgtgacgcctgcc
gacggccgatacaaggcgcgtctgcgcctgctggacggcagcatgtacaagggaacgggc
gaggtgacctttatcgacagccaggtgcagcccacaaccggcgtcatcaaggcgcgcgcc
gtctttgacaatgccgaccgcagcatcatgcccggacagtatgtgcgcctgtatatggac
ggcgacattctcaaggatgccgtgctcgtcccgcagaagtgcgtgctgcttacccagaag
ggttcgctggtcatgggcgtggacaaggacgacaaggtgtattccattcctgtggtcgtc
ggcgtgtccgtcggcaacaggtatcttgtgcttgaagggctcaagggcggcgaacgcatt
atcagcgaaggcatgatcaaggcccgccccggctctcaagtgagcataatgccttcaggg
ggccagcagcctcaggaaggcgcggccaagaagtag
DBGET
integrated database retrieval system
