KEGG   Demequina sp. TMPB413: LGT36_008705
Entry
LGT36_008705      CDS       T08088                                 
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
  KO
K03212  23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
Organism
dem  Demequina sp. TMPB413
Brite
KEGG Orthology (KO) [BR:dem00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dem03009]
    LGT36_008705 (rlmC)
Enzymes [BR:dem01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.189  23S rRNA (uracil747-C5)-methyltransferase
     LGT36_008705 (rlmC)
Ribosome biogenesis [BR:dem03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    LGT36_008705 (rlmC)
SSDB
Motif
Pfam: tRNA_U5-meth_tr MTS Cons_hypoth95 YAcAr Methyltransf_15 Methyltransf_11 Flg_hook Gal4_dimer Methyltransf_23
Other DBs
NCBI-ProteinID: UPU87355
LinkDB
Position
complement(1800495..1801667)
AA seq 390 aa
MECLAYDSGRCRSCTLIETPYVRQVESKQATLERLLGESLPDGDASIAWQEPVVGPESGF
RTKAKMVVAGSADAPTIGILDAQGRGVDLRDCPLYDSRLTAAFPALAAFVSVAGVEPYAV
PERRGELKHIVVTVSPSGGLMARFVLRSTEALSRIRKHLPWLQEQLPALTVVTVNVLPEH
RAVIEGEREIVLTSLDELPMDLGDVTLRLRPQSFFQTNTDVAGALYSLVSAWVHESRPSD
VWDLYCGVGGFALHCLADGRTVTGVESSTQAVVSAQSSARALAESGVPGAQRAHFVAADA
TQWALAQGDSASARVPDVVIVNPPRRGIGAELARWLEHSGVPRVVYSSCNAETLARDLRA
MPSLVPVRARLLDMFPQTEHFEAAVLLERR
NT seq 1173 nt   +upstreamnt  +downstreamnt
atggagtgcctcgcctacgactctggccgttgtcgttcctgcacactcattgagacgccc
tacgtacgacaggtggagtccaagcaggccacactcgagcgtctgctgggcgagagcctc
cccgacggcgacgcctccatcgcgtggcaagaaccggtggtcgggcccgagtctggcttc
aggaccaaagccaagatggtggtagcgggcagcgccgacgcccccacgatcggcatcctc
gacgcccagggtcgtggagtggacctgcgcgattgcccgctgtacgactctcggctgacg
gcggcctttcccgcgctggcggcgttcgtgtcggtcgcgggtgtggagccctatgcggtc
cctgaacgccgcggagagctcaagcacatcgtcgtgaccgtctctccttccggcggtctc
atggcgcgttttgtcctccgctccaccgaggcgctctcgcggatccgcaagcacttgccc
tggctgcaggagcagttgccagcgctcacggtggtgaccgtgaacgtgttgcctgaacac
cgggcggtgatcgagggggagcgagagatcgtgctgacgtcccttgacgaacttcctatg
gaccttggcgacgtgactctgcggctacgcccccagagctttttccagaccaacaccgat
gtcgcgggggcgctctactctctggtctcagcgtgggtgcacgagtcacggccaagcgac
gtgtgggacctctactgcggcgtcggtggcttcgcgctccactgcctcgccgacggtcgc
acagtgacaggcgtcgagtcgtcgactcaggctgtggtcagcgcgcaatcaagcgccagg
gcgttggccgaaagcggcgtgcctggcgctcagagagcgcactttgtcgcggccgacgcc
acccagtgggcgctggctcagggggactccgcctcggcgcgagtgcccgatgtggtgatc
gtgaatccgccgcgacgcggaatcggcgccgaactcgcgcgctggctcgagcacagtggc
gttccgcgcgtggtgtattcgagctgcaatgcggagacgctcgcgagggatctgcgcgcg
atgccgtcgctcgtgcccgtgcgcgcgcgactgctcgacatgttcccgcagacggagcac
ttcgaggctgcagtgctgcttgaacgacgctga

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