Demequina sp. TMPB413: LGT36_008705
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Entry
LGT36_008705 CDS
T08088
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
dem
Demequina sp. TMPB413
Brite
KEGG Orthology (KO) [BR:
dem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dem03009
]
LGT36_008705 (rlmC)
Enzymes [BR:
dem01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
LGT36_008705 (rlmC)
Ribosome biogenesis [BR:
dem03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LGT36_008705 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
Cons_hypoth95
YAcAr
Methyltransf_15
Methyltransf_11
Flg_hook
Gal4_dimer
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
UPU87355
LinkDB
All DBs
Position
complement(1800495..1801667)
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AA seq
390 aa
AA seq
DB search
MECLAYDSGRCRSCTLIETPYVRQVESKQATLERLLGESLPDGDASIAWQEPVVGPESGF
RTKAKMVVAGSADAPTIGILDAQGRGVDLRDCPLYDSRLTAAFPALAAFVSVAGVEPYAV
PERRGELKHIVVTVSPSGGLMARFVLRSTEALSRIRKHLPWLQEQLPALTVVTVNVLPEH
RAVIEGEREIVLTSLDELPMDLGDVTLRLRPQSFFQTNTDVAGALYSLVSAWVHESRPSD
VWDLYCGVGGFALHCLADGRTVTGVESSTQAVVSAQSSARALAESGVPGAQRAHFVAADA
TQWALAQGDSASARVPDVVIVNPPRRGIGAELARWLEHSGVPRVVYSSCNAETLARDLRA
MPSLVPVRARLLDMFPQTEHFEAAVLLERR
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggagtgcctcgcctacgactctggccgttgtcgttcctgcacactcattgagacgccc
tacgtacgacaggtggagtccaagcaggccacactcgagcgtctgctgggcgagagcctc
cccgacggcgacgcctccatcgcgtggcaagaaccggtggtcgggcccgagtctggcttc
aggaccaaagccaagatggtggtagcgggcagcgccgacgcccccacgatcggcatcctc
gacgcccagggtcgtggagtggacctgcgcgattgcccgctgtacgactctcggctgacg
gcggcctttcccgcgctggcggcgttcgtgtcggtcgcgggtgtggagccctatgcggtc
cctgaacgccgcggagagctcaagcacatcgtcgtgaccgtctctccttccggcggtctc
atggcgcgttttgtcctccgctccaccgaggcgctctcgcggatccgcaagcacttgccc
tggctgcaggagcagttgccagcgctcacggtggtgaccgtgaacgtgttgcctgaacac
cgggcggtgatcgagggggagcgagagatcgtgctgacgtcccttgacgaacttcctatg
gaccttggcgacgtgactctgcggctacgcccccagagctttttccagaccaacaccgat
gtcgcgggggcgctctactctctggtctcagcgtgggtgcacgagtcacggccaagcgac
gtgtgggacctctactgcggcgtcggtggcttcgcgctccactgcctcgccgacggtcgc
acagtgacaggcgtcgagtcgtcgactcaggctgtggtcagcgcgcaatcaagcgccagg
gcgttggccgaaagcggcgtgcctggcgctcagagagcgcactttgtcgcggccgacgcc
acccagtgggcgctggctcagggggactccgcctcggcgcgagtgcccgatgtggtgatc
gtgaatccgccgcgacgcggaatcggcgccgaactcgcgcgctggctcgagcacagtggc
gttccgcgcgtggtgtattcgagctgcaatgcggagacgctcgcgagggatctgcgcgcg
atgccgtcgctcgtgcccgtgcgcgcgcgactgctcgacatgttcccgcagacggagcac
ttcgaggctgcagtgctgcttgaacgacgctga
DBGET
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