Demequina sp. TMPB413: LGT36_013325
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Entry
LGT36_013325 CDS
T08088
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
dem
Demequina sp. TMPB413
Pathway
dem03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LGT36_013325 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dem03400
]
LGT36_013325 (nth)
Enzymes [BR:
dem01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LGT36_013325 (nth)
DNA repair and recombination proteins [BR:
dem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LGT36_013325 (nth)
Prokaryotic type
LGT36_013325 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
EndIII_4Fe-2S
HHH
Motif
Other DBs
NCBI-ProteinID:
UPU88208
LinkDB
All DBs
Position
complement(2751166..2751852)
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AA seq
228 aa
AA seq
DB search
MASRDALPVAVEGEAPSVALVRRARRVNRTLAEVYPDAHCELDYTSPFQLLVATVLSAQC
TDVRVNQVTPTLFARFPDAPTMASAPREELEELIRSTGFFRAKASSLLELSADLVRLHDG
DVPGRLRDLVELRGVGRKTANVVLGNAFDVPGITVDTHMGRLSRRLGLTVNDDPVAVERD
LMALIERPQWTLWSHRIIFHGRRRCTARKPDCGGCEIARWCPSAGRVG
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcatcacgtgacgcgcttcccgtggctgtcgaaggcgaggctccttctgtcgccctc
gtgcgccgtgcacggcgcgtcaacaggacgctcgcggaggtctatcccgatgcgcactgc
gagctggactacaccagcccgtttcagttgctcgtggcgaccgtcctgtccgcccagtgc
acggatgtgcgcgtcaaccaggtcacccccaccctttttgcccgcttccccgatgccccc
accatggcgtcggcgccgcgggaggaacttgaagaactcatccgttccacgggcttcttc
cgcgccaaagcgtcgtcgctcttggagctttctgcggacctcgtgcgcctccacgacggc
gacgttcctggcagactgcgcgacctcgtcgagctgcggggcgtaggacgcaagaccgca
aacgtggtgctcggcaacgcgttcgacgtgcctggcatcaccgtcgacacccacatgggc
aggctctccaggcgcctcgggctcaccgtcaacgacgaccccgtggccgtcgagcgcgac
ctgatggcgctcatcgaaaggccgcagtggaccctctggtcgcaccgcatcatcttccat
gggcgccgcaggtgcacggcccgcaagcccgactgcggcggctgcgagatcgccaggtgg
tgcccctcggcgggacgcgtcggctaa
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