Desulfuromonas sp. AOP6: AOP6_0010
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Entry
AOP6_0010 CDS
T08366
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
dep
Desulfuromonas sp. AOP6
Pathway
dep03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AOP6_0010 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dep03400
]
AOP6_0010 (nth)
Enzymes [BR:
dep01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AOP6_0010 (nth)
DNA repair and recombination proteins [BR:
dep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AOP6_0010 (nth)
Prokaryotic type
AOP6_0010 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
BCA78223
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All DBs
Position
12252..12902
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AA seq
216 aa
AA seq
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MAKKRGQSQALETLAILEEIYPEAHCALYYRNPWELLVATILSAQCTDVRVNQVTRTLFR
KFPDMEAFAAADLLDLEDAVRSTGFFRNKAKGIQGSAKVLLETHGGAVPQTLAELVVLPG
VGRKTANVVLGNAFNIPAMVVDTHVGRVSRRLGWTTALTPEAVEQDLCALLPSEKWTMTS
HILIFHGRSFCKAPTPLCSTCPLLSRCPRHGVTRSR
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaaaaggggacagtcgcaggcactggaaactctggcgatccttgaagaaata
tatcccgaggcccactgcgccctctattatcgaaacccctgggaacttctggtggcgacc
atcctgtcggcccagtgcaccgatgtcagggtcaaccaggtcacccggacactgttcagg
aaatttccggatatggaggcctttgctgcggcagatctgctagacctggaggacgctgtg
cggtctactggttttttccgcaacaaagccaagggtattcagggttcagccaaggtattg
ctggaaacgcatgggggcgctgttccacaaacactggccgagcttgtggtcttgccagga
gtgggaaggaaaacagcgaatgtggtgctgggtaatgccttcaacatccctgccatggtc
gtcgatacccacgtgggtcgcgtatcgcgacgccttggctggacgaccgctttaacaccg
gaggctgttgagcaggatctgtgtgcgctattgccgtcagaaaagtggactatgaccagt
catatccttatttttcacggcagaagcttctgtaaggcgcctaccccattatgctcgacc
tgccccctgctgagccgttgtccccgacatggcgtaacgcggtcacgctga
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