Drosophila erecta: 6554319
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Entry
6554319 CDS
T01060
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
der
Drosophila erecta
Pathway
der03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
der00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6554319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
der03041
]
6554319
Spliceosome [BR:
der03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
6554319
Complex C
U5 SnRNP specific factors
6554319
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Dynamin_N
Septin
Ras
TniB
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
6554319
NCBI-ProteinID:
XP_026832122
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MDSDLYDEFGNYIGPDLDSDEDDDQSIYGQPDVQDDPEDAMDEDEVEPQEDEDKEVTAVV
LHEDKRYYPSAVEVYGPDVETIVQEEDAQPLDKPLIEPVKKLKFQIKEQDMQETTYDMEF
MADLMDTPPLIRNVALVGHLHHGKTTFVDCLIRQTHPQFETMEERQLRYTDTLFTEQERG
CSIKATPVTLVLQDVKQKSYLLNIFDTPGHVNFSDEATAAMRMSDGVVLFIDAAEGVMLN
TERLLKHAVQERQAITVCINKIDRLILELKLPPQDAYFKLKHIVEEVNGLLSTYGAADDN
LLVSPILGNVCFASSLYGFCFTLKSFAKLYADTYEGVAYLDFAKRLWGDMYFNSKTRKFS
KKQPHNSAQRSFVEFILEPMYKLIAQVVGDVDTTLSDTLAELNVRVSKEEMKSNIRPLLR
LVCNRFMGDCSGFVDMCVEHIKSPLENAKRKVDHIYTGPKEGDIYRDMISCNQYGTLMVH
SSKMYPNDDCTFFQVLARIVSGTLHAGQEVRVLGENYTLQDEEDSRILQVGRLWVFESRY
KVELNRVPAGNWVLIEGIDQCIVKTSTIVDINVPEDLYIFRPLKFNTQSIIKIAVEPVNP
SELPKMLDGLRKVNKSYPLLSTRVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVAD
PVVAFCETVVETSSLKCFAETPNKKNKITMISEPLEKGLAEDIENGTVCINWNKKRIGEF
FQVNYDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKNLLTAVKDSIVQGFQWGTREG
PLCEEPIRNVKFKILDGVIANEALHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFVEVQ
APADCVSAVYTVLARRRGHVTQDAPVSGSPIYTIKAFIPAIDSFGFETDLRTHTQGQAFC
LSVFHHWQIVPGDPLDKSIIIRPLEPQQASHLAREFMIKTRRRKGLSEDVSINKFFDDPM
LLELARQDVLVNYPL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggattccgatttgtacgatgagtttggcaactatattggccccgatctagacagcgac
gaggatgatgaccagagtatttacgggcaacccgatgtgcaggatgatccagaggacgcc
atggacgaggacgaggtggagccgcaggaggacgaggacaaggaggtgaccgccgtggtg
ctacacgaggataaacgctactatccttcagcagttgaggtctatggtccggatgtggaa
accattgtccaggaggaggatgcccagccgctggacaagccgctcatagagccggtaaaa
aagctcaagttccagatcaaggagcaggacatgcaggagaccacctacgacatggagttc
atggccgatctcatggacactccaccgctaatccgcaacgtggctttagttggccacctg
caccacggcaagaccaccttcgttgactgcctcatccggcagacgcatccacagtttgag
accatggaggagcgccagctgcgctacacggacaccctgtttacggaacaggagcgcggc
tgcagcatcaaggccacgccggtgacacttgtcctgcaggatgtcaagcagaagagctac
ttgctgaacatcttcgacaccccggggcatgtgaacttctcggacgaggccaccgccgcc
atgcgaatgagcgatggtgtggtactgttcatcgatgccgccgagggcgtcatgctcaac
accgagcggctgctcaaacacgcggtgcaagagcgccaggctatcaccgtttgcataaac
aagattgatcgcctcatcctggagctaaaattaccgccccaggacgcctacttcaagctg
aaacatattgtggaggaagtcaatgggctgctgagcacatatggcgccgcagacgacaat
ctcttagtttcgccgatcctgggcaacgtttgtttcgctagttcgttgtacggcttttgt
ttcactctgaaatcctttgccaagctgtatgcagacacttatgagggagtggcttacctg
gacttcgccaagcgtctctggggcgacatgtacttcaacagcaaaacgcgtaagttttcg
aagaagcagccgcacaattcggcacagcgcagctttgtggagttcattctggagcccatg
tataagttgatagctcaggtggttggcgatgtggacaccactttgtcggacactctggcc
gagctgaatgtgcgcgtctccaaggaggagatgaagtcgaatataagaccactactgcga
ctcgtctgtaaccgtttcatgggcgactgcagcggctttgtggacatgtgtgtggagcac
attaagtcccccttggaaaatgccaagcgtaaggtcgaccacatttacactggacccaag
gagggtgacatttaccgggatatgatttcatgcaaccaatacggcactctgatggtgcac
agttccaagatgtatcccaacgacgactgtacgttcttccaagtgctggcgaggattgtc
tctggtactcttcacgctggccaggaggtgcgtgtcctgggagagaactacacactgcag
gatgaggaggactcccgcatactgcaagtgggtcgtctgtgggtatttgagtctcgttac
aaagtggagttaaatcgagtacccgccggaaactgggtgctcatcgaaggcatcgatcag
tgtatcgtcaaaacgtccaccattgtggatattaatgttccagaagacctctacatattc
cggccactgaagtttaacactcagagcattatcaagattgctgtggagccagttaatcca
tccgagcttcccaagatgttggatggcctccgcaaggtgaacaaatcctatccactcctc
tcgactcgagtagaagaatctggcgagcatgttattctgggcactggcgagctgtacctc
gattgtgtcatgcacgacctgcggaagatgtactctgagatcgacattaaggtggcggat
cccgtggtggctttctgcgaaacagttgttgaaactagttcgctgaaatgttttgccgaa
accccgaataagaagaacaaaataaccatgatctcggagccactggagaagggactggcc
gaggacattgagaacggaactgtttgcataaactggaacaaaaaacgcattggagagttc
ttccaggtcaattacgattgggatctgcttgcggcgcgttcgatttgggcctttggtcct
gactccacgggtccaaatatcctcgtcgacgacactctgccctcggaagtggacaagaac
ctgctgaccgcggttaaggattcgattgtgcagggcttccaatggggcacgcgagaaggg
ccgctttgcgaggagccaatccgtaatgtcaagtttaagattctcgatggtgttatcgcc
aacgaggcgttgcatcgaggtggtggacaaatcattccaacagcccgtcgagttgcgtac
tcggcgtttttgatggccacccctcgtctgatggaaccgtatctgtttgtggaagttcag
gcgccggcagattgtgtatccgctgtttatactgtgttggctaggcgcagaggccatgta
acgcaggatgctcccgtttcgggttctcccatctatacgatcaaagccttcatacccgcc
attgattcatttggattcgagacggatctccgcacgcacacccagggccaggccttctgt
ctttcggtgttccatcactggcagatagtgcccggcgatcccctggacaagagcatcata
atccggccactggagccgcagcaagcatcccatttggcccgagagtttatgatcaagacg
cgccgcaggaaaggactttccgaggatgtgtccatcaacaaattcttcgacgatcccatg
ttgctggagctggcgcgccaggacgtgctggtcaactaccccctttag
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