Dermacoccus sp. PAMC28757: H7F30_05115
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Entry
H7F30_05115 CDS
T08446
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
derm
Dermacoccus sp. PAMC28757
Pathway
derm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
derm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H7F30_05115 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
derm03400
]
H7F30_05115 (nth)
Enzymes [BR:
derm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
H7F30_05115 (nth)
DNA repair and recombination proteins [BR:
derm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H7F30_05115 (nth)
Prokaryotic type
H7F30_05115 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
TPR_6
RecR_HhH
TPR_14
Motif
Other DBs
NCBI-ProteinID:
QNK53670
LinkDB
All DBs
Position
1054024..1054896
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AA seq
290 aa
AA seq
DB search
MTSETVTPPKRAARVPETATGRVRQARRIYRRLVEQYPYARAELDFESPLELLVATILSA
QTTDVGVNKVTPVLFGRYPDAAALASAEPSEMEEILRPTGFYRAKTRSVIKLGQELVERF
DGEVPGKLADLVTLPGVGRKTANVVLGNAFGFPGITVDTHFGRLARRFGWTTSTDPVAVE
AEVGEMFPRKDWTMLSHVVVFHGRRICHARKPACGVCPVAQWCPSFGDGETDPDKARALL
KYELAAPKGGEAPVPLLVDGGVPDASFSTGHRGTPVVPRHSGAGAQDEAR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgacctccgaaaccgtgacgccgccgaagcgggccgcgcgcgtgcccgagaccgccacg
gggcgggtgcgtcaggcacgccgcatctaccgcagactcgtggagcagtacccgtacgcg
cgagccgaactcgacttcgagtcgccgctcgaactcctcgtggccaccatcctctcggcg
cagaccacagacgtcggggtcaacaaggtcacgccggtgctcttcggtcgctacccggac
gctgcggcactggcgtcggcggagccgagcgagatggaggagatcctgcgtcccaccggg
ttctaccgggcgaagacgcgctcggtcatcaagctcggtcaggaactcgtcgaacgtttc
gacggcgaggtgccgggcaagctcgccgacctcgtgacgctgccgggcgtcggacgcaag
acggccaacgtcgtgctcggcaacgcgttcggttttccgggcatcacggtcgacacccac
ttcgggcgcctcgcgcgccgcttcggctggacgacgtcgaccgacccggtcgctgtcgag
gccgaggtgggcgagatgttcccgcgcaaggactggacgatgctcagccacgtcgtcgtc
ttccacggccgacgtatctgccacgcccgcaagcccgcatgcggcgtttgcccggtggcg
cagtggtgcccgtccttcggtgacggcgagaccgacccggacaaggcgcgcgccctgctc
aagtacgaactcgcggccccgaagggtggtgaggcgccggtgccgctgctcgtcgacggg
ggagtgcccgacgcctccttctcgaccgggcatcgaggaacgccggtcgtgccacgtcac
tccggtgcaggggcgcaggacgaggcccgatga
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