Defluviicoccus sp. SSA4: HWD60_15270
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Entry
HWD60_15270 CDS
T06717
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
dex
Defluviicoccus sp. SSA4
Pathway
dex01501
beta-Lactam resistance
dex01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dex00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HWD60_15270
01503 Cationic antimicrobial peptide (CAMP) resistance
HWD60_15270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dex02000
]
HWD60_15270
01504 Antimicrobial resistance genes [BR:
dex01504
]
HWD60_15270
Transporters [BR:
dex02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HWD60_15270
Antimicrobial resistance genes [BR:
dex01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HWD60_15270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Telethonin
Motif
Other DBs
NCBI-ProteinID:
QLH40021
UniProt:
A0A7D5S3Z4
LinkDB
All DBs
Position
3222732..3225845
Genome browser
AA seq
1037 aa
AA seq
DB search
MVLSDLSVTRPVLAAVLGLLLIAFGLVAYDRLPLREYPDIDPPVVSIETIYPGAAANVVE
TRITEVIEQRISGVEGIQFIESVSEDGKSKITVEFTIGRDVDGAANDIRDRVSGILDDLP
EEADPPDIQKVDADQDVIMWLNLVSDRLTVPELTDYADRYLVDRFSVLDGVARVRIGGGQ
RYAMRVWLDRQALAARNLTADDVETALRAENVELPAGSIESVERQFTVRVERAFRDAPDF
AGLVLARGDGGYLVRLGDVARVERATEEDRTFFRGNQVPMVGLGIIKQSTANTIAVAQAA
KAEAAKLNPTLPAGMSIEQSYDTSVFIESAIQEVYKTLLIAICLVVLVIFVFLGSVRAML
VPAVTVPISLVATCIVLLVLGFSINLLTLLALVLAIGMVVDDAILVLENIHRRMTEYGET
PLVAAFDGSRQVGFAVIATTLVLIAVFVPIAFLQGDVGRLFSEFALTMAAAVAFSSFVAL
SLSPMLASKVLRRADDESALVRFVDRSFSALRAGYAVALRAALRGRAVVLAIFVGLVAGS
VWLYQHIPSEYAPREDRGAFFVLVNGPEGASYRYMREYMDEIEARLLPLVESGEVSRLLV
RAPRTFNNYENFNSGIVIFVLNDWSKRRTGWAIMDDVRQRLGDLPGVQAFPVMRQGFGVS
IRKPVQFVIGGGTWAQLAEWRDILLAQLAEDNSGLTEIDWDYKETKPQVQVRINYDRAAE
LGVKVGTIGRTLETMLGSRQVTTFLDAGEEYDVILEGERDRQRTPTDLQNIFVRSERSGE
LIPLSNLVTLDYFADSTALNRYNRVRAITIEANLAEGVALGDALAHLDRIAREHLPEQVI
IDYXGESLDFRDAGSSLAFAFLLGIVVVFLVLAAQFESWIHPLVIMLTVPLAIGGGLLGL
YLTHSTLNLYSQIGVIMLVGLAAKNAILIVEFANQLRDEGRPFDDALFDASLIRLRPILM
TGVTTAAGAVPLIVSSGAGAETRFVIGVVVLTGVLTATVLTLFIVPVAYSLLARRTGSPG
DVRRRLMQEKAASQPAE
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggtcctctccgacctctccgtcacacggccggttctcgcagcggtgctggggcttctg
ctcatcgcattcggcctggtggcgtacgacaggttgccgctgcgtgaatatccggacatc
gatccgccggtcgtgtcgatcgaaaccatctaccccggcgccgccgccaatgtcgtcgag
acccggattaccgaagtcatcgaacagcgcatttccggtgtcgagggtatccagttcatc
gagtcggtcagcgaggacggcaaatccaagatcacggtggagttcaccatcggccgtgac
gtggatggtgcggccaatgacatccgtgaccgtgtttccggcattctggacgatctgccg
gaggaggcggacccaccggacatccagaaggtggacgccgaccaggacgtgatcatgtgg
ctcaacctggtcagcgaccgcctgaccgtaccagagctgaccgattacgccgatcgttat
ctggtcgaccgcttctcggtgctggacggcgttgcccgcgtccgtatcggcggcgggcaa
cgctatgccatgcgcgtctggctcgatcgtcaggcgctggcggcacgcaaccttacggcc
gacgacgtggaaaccgcgctgcgggcggagaacgtcgagctgccagccggcagcattgaa
tcggtggaacggcagtttaccgtccgcgtcgagcgtgcctttcgcgatgctccggatttt
gccggactggtgctggcccgaggagacggcggctatctcgtcaggctgggggatgtcgct
cgggtcgaacgggccaccgaagaagatcgcaccttctttcgcggcaatcaggtgccgatg
gtcgggctcggtatcatcaaacagtcgacggccaatacgatcgccgtggcccaggcggcc
aaagcggaagccgcaaagctgaaccccaccttgccggccggcatgagcatcgagcagagt
tacgacacctcggtgttcatcgagagcgcgatccaggaggtctacaagaccctgctgatc
gccatctgtctcgtcgtcctggtgatcttcgtgttcctgggcagcgtccgcgcgatgctg
gttccggccgtcaccgtaccgatttcgctggtggcgacctgcatcgtgctgctggtcttg
ggcttttcgatcaatctcctgacccttcttgccctcgtgcttgccatcgggatggtggtc
gatgacgccattctagtgctcgagaacattcaccggcggatgaccgagtacggagaaacg
cctctggtcgccgcctttgacgggtcgcgccaagtcggcttcgcggtaatcgcgaccact
ctggtgctgatcgccgtgttcgtgcccatcgccttcctgcaaggcgatgtggggcgcctg
ttctcagagttcgcgctgacaatggcagccgcggtcgccttttccagcttcgtcgccctg
agcctctcaccaatgctggcctcgaaggtgctgcggagagcggatgatgaaagcgcgctc
gttcgctttgtcgaccgctcgttttccgccctgcgcgccggttatgccgtggcgctgcgc
gctgccctgcgtggcagggcggtggtgctggcgatctttgtcgggcttgttgcgggctcg
gtctggctgtaccagcacattccgtccgaatacgctccccgcgaggaccggggcgcgttc
ttcgtgctcgtcaacggaccggagggcgcctcctaccgatacatgcgggagtacatggac
gagatcgaggctcgactgctgccgctggtcgagagtggcgaggtcagtcggctgctcgtc
cgcgcaccgcggacattcaacaactatgagaacttcaactccggcatcgtcatatttgtc
ctcaatgattggtcgaagcgccgaaccggctgggcgatcatggacgatgtgcgccaacgc
ctgggtgatcttccgggcgttcaggcatttccggtgatgcggcagggcttcggggtatcc
attcgcaagccggtgcagttcgtcatcggcggcggaacctgggcgcaactggccgaatgg
cgcgacatcctgctggcacagctcgccgaagataattcgggcctcaccgagatcgactgg
gactacaaggaaaccaagccgcaggtgcaggtccgcatcaactatgatcgggccgccgag
ctnggggtgaaggtcggcaccatcggtcggacgctcgagaccatgctgggctcgcgtcag
gtgacgacctttctcgacgccggcgaggaatacgacgtgatcctggagggcgaacgggac
cggcagcgcacgccgacggatctgcagaacatcttcgtgcgctcggagcgctcgggcgaa
ctcattccgctctcgaacctcgttaccctcgactacttcgccgattccaccgcactgaac
cgttacaaccgggtgcgtgcgattaccatcgaggccaatctcgccgaaggtgtcgccctg
ggcgatgcgctggcccatctcgaccggatcgcccgggaacatctgccggagcaggtgatc
atcgactacaanggggaatcactggatttccgcgatgccggaagttcgcttgccttcgcc
tttctgctgggcattgtcgtcgtctttctggtgttggcggcgcagttcgagagctggatt
cacccgctggtgatcatgctgacggtaccgctcgccatcggcggcggcctgctcggcctc
tatctcacccactcgacgctcaatctttacagccagatcggcgtcatcatgctggtcggc
ctggcggcaaagaacgccatcctgatcgtcgagttcgcaaaccagctgcgcgacgaggga
cgtcccttcgacgacgccttgttcgacgcaagcctgatccgcctgcgcccgatcctgatg
accggcgtgaccacggcagccggcgcggttccattgatcgtgtcctccggagccggcgcc
gaaacccgcttcgtcatcggtgtggtggtgctgaccggcgtgctgacggcaacggtgctg
acactgttcatcgtaccggtcgcctacagtctgctggcacggcgaaccggttcacccggc
gacgtccgccgccgcctcatgcaggaaaaggcagcctcacagccggctgagtaa
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