Defluviicoccus sp. SSA4: HWD60_19130
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Entry
HWD60_19130 CDS
T06717
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
dex
Defluviicoccus sp. SSA4
Pathway
dex00270
Cysteine and methionine metabolism
dex00450
Selenocompound metabolism
dex00670
One carbon pool by folate
dex01100
Metabolic pathways
dex01110
Biosynthesis of secondary metabolites
dex01230
Biosynthesis of amino acids
dex04980
Cobalamin transport and metabolism
dex04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
dex00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
HWD60_19130 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
HWD60_19130 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HWD60_19130 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HWD60_19130 (metH)
04980 Cobalamin transport and metabolism
HWD60_19130 (metH)
Enzymes [BR:
dex01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
HWD60_19130 (metH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
UBA_At5g58720
Motif
Other DBs
NCBI-ProteinID:
QLH40623
UniProt:
A0A7D5S5B6
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All DBs
Position
4050396..4054127
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AA seq
1243 aa
AA seq
DB search
MTTSRKGRLAALNVALQHRILVLDGAMGTMIQRHKLEEADYRGERFADWPRDLKGNNDLL
SLTQPAIIRGIHTSYLDAGADIIETNTFNSNSISLADYGQEELARELNVAGARLAREAAD
AKTAETPDKPRFVAGAIGPTNRTASLSPDVGDPGFRNISFDELASAYREAAEGLIEGGCD
LILVETVFDTLNAKAALFAVDELFEAMGLRLPVMVSGTITDLSGRNLSGQTAEAFWNSVQ
HAQPITIGLNCALGAAEMRPHVAELSRVADTYVCAYPNAGLPNAFGEYDETPDMTAAHIR
NWAEEGLVNIVGGCCGTTPDHIAAIAGAVEGVPPRPIPXDPRMLRLSGLEPXRTGLLMRT
FINIGERTNVTGSAKFRKLILAGDYNVGIEIARDQVANGAQIIDINMDEAMLDAEAAMVR
FLNLIASEPDIARVPVMIDSSKWQVIEAGLKCLQGKGIVNSISLKEGEESFLALARKIRR
YGAATVVMAFDEQGQADTAERKVEICARAYHLLTTRIGFPPQDIIFDPNIFAVATGIEEH
NNYAVDFFEATRRIKELLPGVHISGGVSNVSFAFRGNDPVREAMHSVFLYHGIAAGMDMG
IVNAGQIAVYDEIPSELRERVEDVILNRRPDATERLLEIAGTVKGEKKTREVDLSWRELP
VQERLTHALVAGIGEFIEEDTEAARQQAERPLHVIEGPLMTGMNVVGDLFGAGKMFLPQV
VKSARVMKQAVAYLLPFMEAEKDGKPRETAGKILLATVKGDVHDIGKNIVGVVLQCNNYE
VIDLGVMQPCAKILETAKKEQVDIVGLSGLITPSLDEMVYVAKEMQRESFDIPLLIGGAT
TSKVHTAVKIAPSYDGPLVHVVDASRAVGVAQSLLSKAGSTAETYAAQVREDYTTLREAH
ARQHRDRERLPLASARANRLQLEFSNGYAPPRPAEPGLTVFDDYDLAELVSRIDWQPFFQ
TWELSGRFPDILDDPKVGEAARSVYGDAQAMLQRMVGEKWVRARAVIGFWPANTVGDDDI
ELFADESRSGVLAVIHTLRQQMSRDSSRRARANLALADFIAPKESGVPDWLGGFAVTTGH
GLDEVVAAFEKKHDDYASIMAKALADRLAEAFAERLHERVRKEFWGYALDEKLSNEALIA
EKYQGIRPAPGYPACPDHTEKRTLFDLLHAEHNTGIKLTESFAMTPAAAVSGFYFSHPEA
RYFGLGRIHRDQVADYARRKGMNLKECERWLAANLAYDPDLGD
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgagccgcaagggccgcctggccgccctgaacgttgccctgcagcaccgtatc
ctggtgctggacggagccatgggcacgatgatccagcggcacaagctggaggaagccgac
taccgtggcgagcggtttgccgactggccgcgggatctgaagggcaacaacgacctgctg
agcctgacgcagcccgcgatcatccgcggcatccacacttcatacctggacgccggcgcc
gacatcatcgagaccaacaccttcaactcgaacagcatttcgctcgccgactacggccaa
gaagagctggcccgcgaactgaacgtcgccggtgcccgtcttgcccgcgaggccgccgac
gcgaagacggcagaaacaccggacaagccgcggtttgtcgctggcgcgatcgggcccacc
aaccgcaccgcgtcgctctcgcccgatgtgggcgatcccggctttcgcaacatttccttc
gacgaactggcatcggcctacagagaggcggccgaggggctgatcgaaggnggctgcgac
ctgatcctggtcgaaaccgtgttcgataccctgaacgccaaggcggctctgttcgcggtg
gacgagctattcgaggcaatgggtctgcggctgccggtgatggtctcggggacgatcacc
gatctttccggccgcaacctctccggccagacggcagaagccttctggaactcggtgcaa
cacgcgcaaccgatcaccatcggcctcaactgcgcgctcggagccgccgaaatgcgcccg
cacgtagcagaactttcgcgtgtcgccgacacctacgtctgcgcctaccccaacgccggg
ctgccgaacgctttcggcgagtatgacgaaacaccggacatgacggcggcgcacatccgc
aactgggcagaagaagggttggtcaacatcgtgggtggctgctgcggaacaacncccgat
cacatcgcggcaattgcgggcgccgtcgaaggcgtcccgccccggccgatcccggangat
ccccgaatgctgcgcctttccggactcgaacccttncgcactggcctgctgatgcgtacc
ttcatcaacatcggcgagcggaccaacgtcaccggctcggccaagtttcgcaagctgatc
ctcgccggcgactacaacgtcgggatcgagatcgcccgtgaccaggtcgccaacggcgcc
cagatcatcgacatcaacatggacgaggcgatgctggacgcggaagcggcgatggtgcgc
ttcctcaacctgatcgcgtccgagccggacatcgcccgcgtgccggtgatgatcgacagc
tccaagtggcaggtgatcgaggccggtctgaagtgcctgcagggcaagggcatcgtcaat
tcgatcagcctcaaggagggcgaggaatcgttcctcgcgctcgcacgcaagatccgccgc
tacggcgccgccaccgtggtcatggccttcgacgagcagggccaggcggacacggccgag
cgcaaggtcgagatctgcgcccgcgcctaccacctgctcaccacccggatcggctttccg
ccacaggacatcatcttcgatcccaacatctttgccgtcgctaccgggatcgaggagcac
aacaactacgcggtggacttcttcgaggcgacgcgccgaatcaaggagctgttgccgggt
gtacacatctccggcggcgtgtccaacgtctcctttgccttccgcggcaacgatccggtg
cgcgaggcgatgcactcggtgttcctctatcacggcattgccgccgggatggacatgggc
atcgttaatgccggccagatcgccgtgtacgacgagatcccgtcagagctgcgtgagcgg
gtcgaggacgtgatcctcaaccgccggccggacgcaaccgagcggctgctcgagatcgcc
ggcaccgtcaagggtgaaaagaagacgcgcgaggtggacctctcctggcgcgagttgccg
gtgcaggaacggctgacgcatgcgctggtcgccgggatcggcgaatttatcgaggaggac
accgaggcggcacgccagcaggcggagcggccgctgcatgtgatcgaagggccgctgatg
accggcatgaacgtggtcggcgacctgttcggggccggcaagatgttcctgccgcaggtg
gtgaagagcgcccgcgtgatgaagcaggcggtcgcttacctgctgccgttcatggaggcg
gagaaggacggcaagccgcgggaaacggctggaaaaattctcctcgccaccgtcaagggc
gacgtgcacgacatcggcaagaacatcgtgggcgtcgtcttgcagtgcaacaactacgaa
gtcatcgacctcggcgtcatgcagccgtgcgccaagatcctggagacggcgaaaaaggag
caggtggacatcgtcggcctctcgggtctgattacgccgtcactggacgagatggtgtac
gtggcgaaggaaatgcagcgggagagctttgatatcccgttgctgatcggcggcgccacc
accagcaaggtgcacacggcggtcaagatagcgcccagctacgacggccctctggtgcac
gtggttgatgcatcccgggcggtcggggtagcgcaatcgctgctgtcgaaagccggcagc
actgccgagacctacgcggcccaggtccgtgaagactacaccactttgcgcgaggcgcat
gcccgacagcaccgggacagggagcggttgcccctggcgtccgcccgtgccaaccgtctg
caactggaattcagcaacggctatgcaccgccgcgccccgccgaacccggactgacggtg
ttcgacgattacgatctcgcggagctggtgagccggattgattggcagccgttctttcag
acctgggagctatccggacgctttccggacatcctcgacgatccaaaggtcggcgaggca
gcgcgctcggtctacggcgacgcgcaggcgatgctgcagcggatggtgggcgagaagtgg
gtgcgcgcccgcgcggtgatcggcttctggccggcaaataccgtcggtgacgacgacatc
gagctgttcgccgacgaaagccgttcgggcgtgctggcggtgatccatacgctgcgccag
cagatgtcccgcgattcatcccgccgagcgcgcgccaatctcgcgctggccgacttcatc
gcccccaaggagtcaggcgtgccagactggttgggcggtttcgccgtgaccaccggtcac
gggctggacgaggtggtggccgcgttcgagaagaagcacgacgattacgcctcgatcatg
gccaaggccctggccgaccggctggcggaggcgtttgccgagcggctgcacgagcgggtg
cgaaaggagttctggggctatgcgctggacgagaaactctcgaacgaagcgcttattgcg
gaaaagtaccagggcatccgcccggcgccgggctaccctgcatgtcccgaccacaccgaa
aagcgcactctgttcgacctgctgcacgccgagcacaacaccggcatcaagctcaccgaa
agcttcgccatgacccccgcagccgcggtctccggcttctacttctctcatcccgaagcc
cgctacttcgggctgggccgtatccaccgcgaccaagtggcggactacgcccggcgcaag
gggatgaacctgaaggaatgcgagcgctggcttgccgcaaacctcgcctacgacccggat
ctgggagactga
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