Dechloromonas sp. HYN0024: HYN24_02020
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Entry
HYN24_02020 CDS
T05616
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
dey
Dechloromonas sp. HYN0024
Pathway
dey01501
beta-Lactam resistance
dey01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dey00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HYN24_02020
01503 Cationic antimicrobial peptide (CAMP) resistance
HYN24_02020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dey02000
]
HYN24_02020
01504 Antimicrobial resistance genes [BR:
dey01504
]
HYN24_02020
Transporters [BR:
dey02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HYN24_02020
Antimicrobial resistance genes [BR:
dey01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HYN24_02020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Patched
HMA
Spore_YhcN_YlaJ
Motif
Other DBs
NCBI-ProteinID:
AXS78915
LinkDB
All DBs
Position
405719..408781
Genome browser
AA seq
1020 aa
AA seq
DB search
MNVSSWSIRNPTPAVLLFLLLTLAGVMGFKAMKIQQFMDIDLPTVTVTASLPGAAPAQME
TEVARKIENSVATLQGIKHIYTKVQDGVATVTVEFRLEKSTQEAVDDVRDAVSRIRADLP
GDIKDPVISKVNLSGAPILTYTVASGRMDDEALSWFVDNTVTKALLSARGVGAVSRVGGV
TREIRIELDPARMLALQVTAADISRQLRQIQQEASGGRADVGGVEQSVRTIATVNSADQL
GDMDITLSDGRRIRLGQVATISDTVGEQRTAALLNGKPVVGFEITRSKGAGEVEVADNVK
GVLEKLKAEHPDIEITEAFNFVDPVIENYEGSMKLLIEGALLAVLVVWLFLRDGRATFVS
AAALPLSAVPTFAAMYLMGFTLNVVTLLSMSLVVGILVDDAIVEIENIMRHLRMGKTPYQ
AAMEAADEIGLAVIATTFTLIAVFLPTAFMGGVPGKFFVQFGWTAAIAVFFSLVVARMLT
PMMAAYILRPVMHDEPTPGWLAMYEGWATWCLKHRIMTMLGAAFFFVGSFMLVPLLPTGF
VPPDDVSQTQIYLSLPPGATFTETLSAAEQARRIAQHNPHVKLVYTAIGGGKAGSDPFAP
AGAAEVRKATLTLNLTPRSERSGVGKQFIEGQLRDALTMIPGVQVKVGLASGNAKYVLVL
ASENGPLLAEHARLVERDLRTIPGIGNITTTASLVRPELVIRPDFARMADLGVTSAAIAD
TLRIATAGDYDQGLAKLNLAQRQVPIIVKLPPAARSDLALLERLTVPGKHGPVVLANVAS
VSIGGGPAEIDRYDRLRNINFEIELNGEQLGEVEAKALRLPSLAQLPPGIIQTTVGDAEA
MGELFASFALAMATGVLCIYIVLVLLFKDFVQPVTILAALVLSVPGAFLALFVTHTALSM
PSMIGLIMLMGIATKNSILLIDYVVLARREHGLNRWDALLDACRKRARPIVMTTVAMGAG
MMPIALGIGTDPSFRAPMAIVVIGGLITSTFLSLLVIPVVFTYVDDLIGLVRARFGLKPH
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgtctcgtcctggtcaatccggaatccgaccccggccgtcctgctttttctgctg
ctgacgctggctggcgtcatgggtttcaaggccatgaagatccagcagttcatggatatc
gacttgccgaccgtgaccgtcacggccagcctgcccggcgcggcgccagcgcaaatggaa
accgaagtggcgcgcaagatcgaaaattcggtggcgacgctgcagggtatcaagcacatc
tataccaaggtgcaggacggggtggcgacggtgactgtcgagttccgtctggaaaagtcg
acacaggaagctgtggacgatgtccgcgacgccgtttcgcggattcgtgccgacctgccg
ggcgacatcaaggatccggtgatcagcaaggtgaacctgtccggcgcaccgatcctgacc
tacaccgtggcatccggccggatggacgacgaggcgctgtcatggttcgtggacaacaca
gtgaccaaggccctgctctcggcgcgcggtgttggtgcggtctcccgggtcggtggcgtg
acgcgggaaatccgcatcgagcttgacccggcccggatgctcgcgcttcaggtcacggcc
gccgatatctcgcgccagcttcggcagatacagcaggaggcgtccggggggcgggccgat
gtcggaggggtcgagcagtcggtacgtaccatcgccacggtcaacagcgccgatcaactc
ggtgacatggacatcacgctctctgatggtcgccgcatacgcctcggtcaggtggcgacg
atcagcgataccgttggcgaacagcggacggctgccttgctcaacggcaaacccgtcgtc
ggctttgaaatcacgcgcagcaagggggccggagaggttgaagttgccgacaacgtcaag
ggtgtcctggaaaagctcaaagccgagcatcccgatatcgaaatcaccgaggcgttcaat
tttgtcgatccggttatcgagaactatgaaggctcgatgaaactgctgattgaaggcgcc
ctgctggccgttctggtcgtctggctattcctgcgcgatggccgggccaccttcgtttcg
gcggccgctttgcccttgtcggcggtgccgactttcgcggcgatgtacctgatgggcttc
acgctcaatgtcgtgaccctgctctccatgtcgctggtggtcgggattctggtcgatgac
gccattgtcgaaatcgaaaacatcatgcgccatctgcgcatgggcaagacgccctatcag
gccgccatggaggcagccgacgagattggactggcggtcatcgcgacaaccttcacgctg
attgccgtttttttgccgactgccttcatgggcggtgttcccggaaagttttttgtccag
ttcgggtggacagcagcgattgccgtgtttttctcactggtcgtggcgcgtatgctgacg
cccatgatggcggcctacatcctgcgtccggttatgcacgatgaaccgacgccgggctgg
cttgctatgtatgagggctgggcgacgtggtgcctgaagcatcgcatcatgaccatgctc
ggggcagcgttcttttttgtcggctcattcatgctcgtgccgcttctgccaactggcttt
gtgccacctgatgatgtttcgcagacgcagatctacctttcactgccgcccggtgcgacc
tttactgaaaccctttcggcggccgagcaggcgcgccgcatcgcgcaacacaacccgcac
gtcaaactggtatataccgcgatcggtggcggcaaggccggcagtgacccctttgcgccg
gcaggtgcggccgaggtgcgcaaggccacgctgacgctcaacctgaccccgcgcagcgag
cgttccggggtcggcaagcaatttatcgaaggccagttgcgcgatgcactgacgatgatt
cccggcgtccaggtcaaggtcgggctggcctcgggtaacgccaagtacgttcttgtcctg
gccagcgaaaatggccccttgctggccgagcatgcccgcctggtcgaacgcgacctgcgc
accattccgggaatcggcaacatcaccacgacggcgagcctggttcgtcccgaactggtc
attcgccccgattttgcccgcatggccgatcttggcgtgacgtcggcggccatcgccgac
accctgcgtattgccacagcaggcgactatgaccaggggctggccaagctcaatctcgcc
cagcgtcaggtgccgattatcgtcaaattgccacctgccgcccggtccgatctggccctg
ctcgaacgcctgaccgtgcccggcaagcacggcccggtggtccttgccaatgttgcctcg
gtcagtattggcggcggtccggcggaaatcgaccgctatgaccgtttgcgcaatatcaac
tttgaaatcgaactgaacggcgagcagcttggcgaagttgaggccaaggccttgcgcctg
cccagccttgcccaactgccgcccggcatcatccagaccacggtcggcgatgccgaggcg
atgggcgaactgttcgccagttttgccctggcgatggcgaccggggtactgtgtatttac
atcgtgctggtcctgctcttcaaggatttcgttcagccggtgaccattctcgctgccttg
gtgctttccgtgcccggcgcattcctggccctgttcgttacgcacacggcactgtcgatg
ccgtcgatgatcggcctcatcatgcttatgggcatcgccaccaagaactccattctgctc
atcgattacgttgtactcgctcgccgcgagcatggcctgaaccgctgggatgccctgctc
gatgcctgtcgcaagcgggcccggccgatcgtcatgaccaccgtcgcgatgggtgccggc
atgatgccgattgccctgggtattggtaccgatccgagcttccgcgcaccgatggcgatt
gtcgtgatcggcggactgatcacctcgaccttcctcagtctgctggttattcccgtggtg
tttacctacgtcgacgacctgatcgggctggtccgtgcaagattcggactgaagccacat
tga
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