Dechloromonas sp. HYN0024: HYN24_12880
Help
Entry
HYN24_12880 CDS
T05616
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
dey
Dechloromonas sp. HYN0024
Pathway
dey00300
Lysine biosynthesis
dey00550
Peptidoglycan biosynthesis
dey01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dey00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HYN24_12880
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HYN24_12880
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dey01011
]
HYN24_12880
Enzymes [BR:
dey01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
HYN24_12880
Peptidoglycan biosynthesis and degradation proteins [BR:
dey01011
]
Precursor biosynthesis
Amino acid ligase
HYN24_12880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AXS80838
LinkDB
All DBs
Position
complement(2681951..2683423)
Genome browser
AA seq
490 aa
AA seq
DB search
MSPRQLLDQLEAMGVVPTGVADDSRQVLPGDIFLAYPGDLADGRRYIADALTRGAVAVLW
QPGGDFNFSFQVANLSVESLRPLAGPLAHAVYGHPSEGLSLIAVTGTNGKTTISQCLAKA
YPKPCAIIGTLGAGFPDGLTETGFTTPEATTLMRYLAQFRTAGAAACALEASSIGIEEGR
MNGARVDVAVFTNMTRDHLDYHGTMEAYAEAKKKLFLWPRLRTAVINLDDELGRILSRET
TAQRILGYAIGEQRRDYPALVRAENLVDTPFGQRFTLVVPNGRAVVDSGLVGCYNISNLL
AVAAVLHDAGVQAVEVARRLSELMPPPGRMERVGGQGEPLIVVDYAHTPDALENALGALR
GVANSRGGRLCVVFGCGGDRDPGKRPQMGEVAERLADRVLVTSDNPRSEAPQAIIAAIVA
GMSQAEVEVDRAAAILRVIGEADAADVVLLAGKGHESYQEVAGVRHHFSDVEQAGAALAM
RNPENKEVAA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgcgtcaacttctcgaccagcttgaagcgatgggcgtcgtgccaaccggcgtt
gccgacgatagtcgtcaggtgctgccgggcgatatcttcctggcttatcccggcgatctg
gccgatggccgtcgttacatcgccgatgccctgacgcgcggggcggtagcagtcctttgg
caaccgggtggcgacttcaacttctcgttccaggtcgccaatctgtcggtggagtcgctt
cgcccgctggccggccccttggcgcatgctgtttatggccaccctagcgaaggcttgtca
ctgattgctgtcaccggcaccaatggcaagacgacgatcagccagtgtctggccaaggcc
tatccgaaaccgtgtgccatcattggtacgctcggtgcaggttttccggatgggctcacc
gaaaccggctttacaacccccgaagccaccacgctgatgcgctatctggcgcaattccgc
acggcgggggctgccgcctgtgccctcgaagccagttcgatcggtatcgaggaggggcgg
atgaacggtgcccgagtcgatgtcgcggtgtttaccaacatgacgcgcgatcacctcgac
tatcacggcaccatggaagcctacgccgaggccaagaaaaagctcttcctgtggccgcgt
ctgcgcacggccgtcattaatctggatgacgaactcggtcgcatcctgtcacgcgaaacg
acggcgcagcgtattctcggctacgccattggggagcagcggcgcgattatcccgcgctg
gtacgggccgaaaatctggtcgatacgccgtttggtcagcgcttcaccctggttgtgccg
aatggccgggcggtggtcgatagcggactggtcggttgctacaacatctccaatctgctg
gccgtggctgctgtgttgcacgatgccggcgtgcaggcggtcgaagtggcgcgtcgcctc
tccgagcttatgccgccgccgggacgcatggagcgcgtcggtggccagggcgagcccctg
atcgtcgtggattatgcccatacccctgatgccctcgagaatgcgctgggcgcgttgcgt
ggggtggccaactcgcggggcggccgcctgtgtgtcgtcttcggttgcggcggtgaccgc
gatccgggcaagcgtccgcaaatgggcgaagtggccgagcggctggctgaccgtgtgctg
gtgaccagtgacaatccgcgcagcgaagccccgcaggccatcattgccgccattgttgcc
ggtatgtcccaggccgaagtcgaggttgaccgggccgccgccattctccgtgtcatcggc
gaagctgatgcggcggatgtcgtcctgctcgccggtaagggccatgagtcctatcaggaa
gtcgctggtgttcgtcatcacttctccgatgtcgagcaagccggcgcagcgttggctatg
cgcaatccggaaaacaaggaggtcgcggcatga
DBGET
integrated database retrieval system
