KEGG   Desulfurococcus amylolyticus DSM 16532: Desfe_0423
Entry
Desfe_0423        CDS       T02136                                 
Name
(GenBank) HhH-GPD family protein
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
dfd  Desulfurococcus amylolyticus DSM 16532
Pathway
dfd03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dfd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Desfe_0423
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dfd03400]
    Desfe_0423
Enzymes [BR:dfd01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Desfe_0423
DNA repair and recombination proteins [BR:dfd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Desfe_0423
 Prokaryotic type
     Desfe_0423
SSDB
Motif
Pfam: HhH-GPD Ogg-HhH EndIII_4Fe-2S HHH RecR_HhH
Other DBs
NCBI-ProteinID: AFL66333
UniProt: I3XQV9
LinkDB
Position
399771..400475
AA seq 234 aa
MDTRIGDEVLNRLRKEYKLDADEFVVSERCIQSNRLFEIITAVILSQNTSDRNACRALKK
LRELTGGVITPETVLLLPVDKLEDALRPAGMYRNRSRVIRELASMFNQSGFQERLISEVS
RSSVEEARRLLMELPGVGWKTADVVLLRYFRKPVFPVDTHITRITMRMGFTGSRSYKHIS
RFWMDNTSPENYLDLHLYLITHGRRTCRARKPLCNKCVLRDMCRYGVDAVDDEG
NT seq 705 nt   +upstreamnt  +downstreamnt
ttggatactaggatcggggatgaagtgctgaataggttaaggaaggagtataagctggat
gcggatgaattcgtggtatctgagagatgtattcaaagcaaccggttgtttgagataata
acggctgtgattctaagccagaacactagcgatagaaacgcttgcagggcgttgaagaag
ctcagggagttaaccggtggagtcatcacgcctgagacagtgctcttgctaccggttgat
aaactagaggatgccttgagaccagcgggtatgtataggaataggtctagggtgatcagg
gaactcgcctccatgtttaaccagagtggcttccaggagagattaatcagcgaggtgagt
aggagtagtgtggaggaggcacggagactactcatggagctacctggtgtcggctggaaa
acagcggatgtcgtgttattaaggtatttcagaaaacccgtgttcccggttgacacgcat
ataaccaggataacgatgcggatgggtttcaccgggtcaaggagctataagcatatatcg
cggttctggatggataatacatcccccgagaactacctggatctacacttgtatcttata
acacatggtaggagaacatgcagggcgcggaaacccctttgcaataaatgcgtcctgaga
gacatgtgcaggtatggggttgacgctgtcgatgacgaggggtag

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