Dyadobacter fermentans: Dfer_5369
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Entry
Dfer_5369 CDS
T00970
Name
(GenBank) cobyric acid synthase CobQ
KO
K02232
adenosylcobyric acid synthase [EC:
6.3.5.10
]
Organism
dfe
Dyadobacter fermentans
Pathway
dfe00860
Porphyrin metabolism
dfe01100
Metabolic pathways
dfe01240
Biosynthesis of cofactors
Module
dfe_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Dfer_5369
Enzymes [BR:
dfe01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.10 adenosylcobyric acid synthase (glutamine-hydrolysing)
Dfer_5369
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GFIT
Motif
Pfam:
GATase_3
CbiA
AAA_26
Peptidase_S51
Motif
Other DBs
NCBI-ProteinID:
ACT96562
UniProt:
C6VU80
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All DBs
Position
6491907..6493382
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AA seq
491 aa
AA seq
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MNAKKLRPIMFVGTGSDVGKSVIAAGFCRIFRQDGYQPAPFKAQNMSLNSFVTPDGLELG
RAQAVQAEAAQVACESDMNPVLLKPTSDKSSQVVLNGKPVGNQTAYEYFMGNDRRELFAA
VKDAFDRLAAKYSPIVMEGAGSISELNLKHRDITNLRMAAHAGAATYLIADIDKGGVFGS
VYGTIALLTPEERACMKGIIINKFRGDGRLFEDGRQMLEELTGLPVVGVLPYFRDIHIEQ
EDSVSLELKYRSAVEGKVNVAVILLNRLSNFTDFDRLEKDMRVNLYYTNNPSEIAKASIV
IVPGSKNTIGDMLAIKNNGVAKAICEAHKAGNTVIGICGGYQMLGERIMDPHHVESEIEE
LPGLGLLPVETILEREKTTLQSTFRFRQAEQVCTGYEIHMGRTTAFQPGEAVVTMMDGRR
DGYFRDDRTWGTYLHGILDNDVVIEQMLAPYTQEKAVTYDYAQFKEQQYDKLAALLRAHI
DMDLIYNSIAE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctaaaaaattacgtccgatcatgtttgtcggcacgggctcggatgtgggcaaa
agcgtgattgcggccggtttctgccggattttcaggcaggacggctaccagcctgcgcct
ttcaaggcccagaacatgtcgctcaacagcttcgtcacgcccgatggcctggaactgggc
cgcgcacaggcggtacaagccgaagcagcgcaggtagcgtgcgaatcggatatgaacccg
gtgctgctgaaaccgaccagcgacaaatcttcgcaggtggtattgaatggaaaaccggtg
ggtaaccaaacggcctacgaatatttcatgggcaacgaccgccgcgagctgtttgcggcc
gtgaaggatgccttcgaccgccttgcagccaaatattcgccgatcgtaatggagggcgcg
gggagtatttccgaactcaacctgaaacaccgggatattactaatctaagaatggcggcc
cacgcaggcgcggctacctacctgatcgccgatatcgacaaaggcggggtgtttggcagc
gtgtatggcaccatcgcattgctcacgcccgaggagcgggcgtgtatgaagggtatcatt
atcaataaattccgtggcgacggccggttgtttgaagacggccggcaaatgctggaagaa
ctcaccggtttgccggtggtcggtgttttgccgtatttccgggatatccatattgaacag
gaagattcggtgtcgttggagctcaaataccgctctgcggtggaaggaaaagtgaatgta
gctgtgatcctgctcaaccggctatccaattttacagattttgaccggctggaaaaggat
atgcgcgtgaatttgtattataccaataacccctccgaaatagcaaaggcgtcgatcgtg
atcgtgccgggaagtaagaataccatcggggatatgctggcgattaagaataatggcgtg
gcgaaggccatttgcgaggcgcataaggcgggaaataccgtgatcgggatttgcggcggt
taccaaatgctcggcgagcggatcatggacccgcaccatgtggaaagtgaaattgaagaa
ttgccaggcctcggactcctgccggtggaaacgatcctggaacgcgaaaagaccacactc
caaagcactttccgtttcaggcaggcggagcaggtgtgcaccggctatgaaattcatatg
ggcagaacaacggcattccagcccggagaggcggttgtgacgatgatggacgggcggcgg
gacggctacttccgcgacgaccgtacctggggcacctacctccacggcatcctcgacaac
gacgtggtgatcgagcaaatgctcgcgccctacacgcaggaaaaagcagtgacgtacgat
tacgcacaatttaaggaacaacagtacgataaactcgctgcattgctccgggcgcacatc
gatatggatttgatttacaacagcatagcagaataa
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