Desulforamulus ferrireducens: B0537_12175 Help Entry B0537_12175       CDS       T04823                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism dfg  Desulforamulus ferrireducens Pathway dfg03030   DNA replication dfg03410   Base excision repair dfg03420   Nucleotide excision repair dfg03430   Mismatch repair Brite KEGG Orthology (KO) [BR:dfg00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     B0537_12175    03410 Base excision repair     B0537_12175    03420 Nucleotide excision repair     B0537_12175    03430 Mismatch repair     B0537_12175  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:dfg03032]     B0537_12175    03400 DNA repair and recombination proteins [BR:dfg03400]     B0537_12175 Enzymes [BR:dfg01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      B0537_12175 DNA replication proteins [BR:dfg03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      B0537_12175 DNA repair and recombination proteins [BR:dfg03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      B0537_12175    NER (nucleotide excision repair)     GGR (global genome repair) factors      B0537_12175    MMR (mismatch excision repair)     DNA ligase      B0537_12175   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       B0537_12175 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 Nlig-Ia DNA_ligase_ZBD PTCB-BRCT HHH BRCT_2 HHH_8 HHH_3 UPF0758_N zf-tcix Motif Other DBs NCBI-ProteinID:  AQS59767 UniProt:  A0A1S6IYC2 LinkDB All DBs Position complement(2493630..2495633) Genome browser AA seq 667 aa AA seqDB search MDSKIKDRAEELRRQIHRHNYQYYALDNPIISDAEFDQLMQELLQIEEKYPELVTADSPT QRVGGVVQKGFNSVPHRIPMLSLGNAFNEGDLREFDRRVRNSLPGEAVSYVVELKIDGLA ISLWYEKGVLVRGATRGDGEMGEDITVNLKTVKAIPLRLAEEVPFIEVRGEAYMPKESFV RLNEAREEAGEPLFANPRNAAAGSLRQLDPRITASRNLSVFMYAIGHLEGNSPGSHAKGL DWLKQLGFRVNPHYKVCQDIQEVIEYCQQWQEKRFDLPYAIDGMVIKVDSLAQQERLGAT LKSPRWAIAYKFPAEQAVSTIKDIILRVGRTGVLTPTAILEPVQLAGTTVSKATLHNEDI IVQKDIRIGDQALVQKAGDIIPEIVQIYPERRTGKERPFTMPATCPECGAQVVRVPGEAA HRCTNENCPAKSREGIIHFVSRGAMDIVGLGEGIINQLIKGGLVKDPADLYDLKYEELIR LERMGARSSQKLLDAIAVSKNNSLSQLLFGLGIRHVGERAAKILARQFGSLDSLRSASVE DLTNIPEIGPRIAQSVVEYFNKPENQVLLERLAQAGVNMQEQIAHAEGEEQTLAGKTFVV TGTLQNFTRQEAQQAIEKLGGKVSGSVSKKTDYVVVGENPGSKHDKALQLGITILNEEEF MALLQGK NT seq 2004 nt NT seq  +upstreamnt  +downstreamnt ttggatagtaaaattaaggaccgggcggaggagttgcgccggcagatccaccggcataat tatcaatactatgccctggataatccgatcatcagtgatgctgagttcgatcaattaatg caggaattgctacaaatagaagaaaaatatcccgaactggtgactgcagactcgccaacc cagcgggtagggggagtggtacaaaagggtttcaattcagtaccccacagaattcccatg ctcagtctgggaaatgcctttaatgaaggagacctcagggaatttgaccggcgggtgcgg aacagtttgcccggtgaagcagtttcctacgtggtggaactgaagatagacggcttggcc atttctctttggtatgagaagggtgtcctggtgcggggtgccacccgcggtgacggagaa atgggcgaggatattaccgttaaccttaaaactgtgaaagccatccccttacgactggct gaagaagtaccctttatcgaggtacggggtgaggcctatatgcccaaggaatcctttgtg cgcttaaatgaggcacgggaagaggcaggcgagccgctttttgccaatccccgtaatgct gcggcgggcagcttgcgacagttagacccacgaatcactgcttcccgcaacctcagtgtt ttcatgtacgccattggccacctggaagggaacagtcccggcagccatgcgaagggactg gactggctaaagcagttgggtttccgagtaaatccccactataaagtatgtcaggatatc caggaagtaattgaatattgccagcagtggcaggagaagcggtttgacttgccctatgcc attgacggtatggtgattaaggtagattccttggcgcagcaggaacgtttgggtgccact ttgaaaagtccccgttgggccattgcctacaagtttccggcggagcaggcggtcagtacc attaaagatattatcctccgagtggggcgaaccggtgtgttaactcccaccgccatcttg gaaccggtgcaattggcaggcaccaccgtgagtaaggctaccttgcataatgaagatatt attgtgcaaaaggatattcgcattggggatcaggcgctggtacaaaaggccggggatatc atcccggagattgtgcaaatctatcccgaacggcgtaccggcaaggaaaggccctttacc atgccggccacctgcccggaatgtggcgcacaggtggtcagggtgccgggagaggccgcc catcgttgtaccaacgagaattgcccggctaagtcccgggagggcattattcattttgtt tcccggggcgccatggatattgtggggctgggggaaggaattatcaaccagcttattaag ggcggtctggtcaaggatccggcggatctctatgatttaaaatatgaagagttaattcgt ttggaacgcatgggagcccgttcctcccaaaagctgctggatgccattgctgtcagtaaa aataactctctgtcccagcttttatttggcctgggtattcgccatgtgggtgaaagggct gccaaaattttggcccggcaatttggttccctggactcactcaggtcagccagcgtggag gatcttaccaacataccggaaatcggcccccgcattgcccagagtgtggtggagtacttt aacaagccagaaaaccaagtactactggaacgcttggcccaggccggtgtgaatatgcag gagcaaatagcccacgccgaaggagaggagcaaactttggccggtaaaacctttgtggtt accggcacactgcagaactttacccgtcaggaagcccagcaggccatcgaaaaactgggt ggcaaagtttccggcagtgtaagcaaaaaaacagattatgtggtggtgggagaaaaccct ggctccaagcacgataaagctttgcaattagggataaccatactcaatgaagaggagttt atggctttgctgcagggtaagtaa

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