Dickeya fangzhongdai DSM 101947: CVE23_09880
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Entry
CVE23_09880 CDS
T05277
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dfn03009
]
CVE23_09880
Enzymes [BR:
dfn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
CVE23_09880
Ribosome biogenesis [BR:
dfn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CVE23_09880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Cons_hypoth95
Methyltransf_12
UPF0020
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
ATZ96635
UniProt:
A0A2K8QU54
LinkDB
All DBs
Position
2181101..2182231
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AA seq
376 aa
AA seq
DB search
MQCARYNDGSCRSCQWLEIAYPQQMSDKQQHLIGLLSAHPVQQWLTPVTSAEVAFRNKAK
MVVSGSVERPLLGMLHRDGSAVDLCDCPLYPDSFTPVFAILKVLIARAGLTPYNVARRRG
ELKYLLLTQSTLSGRFMLRFVLRSETKLAQLRAALPWLQQQLPQLAVISANIQPVHQAIL
EGEQEIPLTEAQALEERFNQVPLYIRPQSFFQTNPQVAAALYDTARQWVSALPVRSLWDL
FCGVGGFGLHCASPDTPLTGIEISQEAIACARRSAEQLGLTEVSFAALDSTRFAVGETQT
PDLVIVNPPRRGIGAELCDYLSRMAPPYLLYSSCNAESMARDIARLPAYQIQQAQLFDMF
PHTAHYEVLALLQRRV
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgtgcccgctataacgacggttcgtgccgttcctgccaatggctggaaatcgcc
tatccgcagcagatgagcgataagcagcaacacctgatcggattgctgtccgcccatccg
gttcaacaatggctgacgccggtgacctcggcggaagtcgcttttcgcaataaagccaag
atggtggtcagcggcagtgtggaacgcccgctgttggggatgctgcaccgtgacggttcg
gcggtggatctctgcgactgtccgctgtatcccgacagctttacgccggtgttcgccata
ctgaaagtgctcatcgcccgtgccggcttaactccttataacgtcgcccggcgtcgggga
gaactgaaatacctgttgttgacgcagagcaccctgagcggccgcttcatgctgcgcttt
gtgctgcgatccgaaaccaagctggcgcaattgcgcgccgcgttgccctggctgcaacag
cagttgccgcagttggcggtgatatcggcgaatattcagccggttcatcaggcgatactg
gaaggagagcaggagattccgctgacagaagcgcaggcgctggaagagcgttttaatcag
gtgccgctgtatatccgaccgcaaagtttcttccagaccaacccgcaggtggcggcggcg
ttgtatgacaccgcccggcagtgggtatcggcgttgccggtgcgcagcctgtgggatctg
ttttgtggcgtgggcggattcggcctgcattgcgccagccctgacacgccgcttaccggc
attgagatcagccaggaagccatcgcctgcgcccgtcgttcggcggagcagctggggctg
acagaggtcagttttgccgcgcttgattccacccgctttgccgttggcgagacccagacg
ccggatctggtgatcgtcaacccgccccggcgcggtatcggcgctgaattgtgcgattac
ctaagccgcatggcgccgccgtatctgttgtactccagctgcaatgccgagagcatggcg
agagacattgcgcgcctgccggcgtaccagatacagcaggcgcaactgttcgatatgttc
ccgcacaccgcgcattacgaggtgctggcgctgctgcaacgacgcgtttaa
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