Dickeya fangzhongdai DSM 101947: CVE23_18830
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Entry
CVE23_18830 CDS
T05277
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Pathway
dfn00540
Lipopolysaccharide biosynthesis
dfn01100
Metabolic pathways
Module
dfn_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CVE23_18830 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dfn01005
]
CVE23_18830 (lpxC)
Enzymes [BR:
dfn01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
CVE23_18830 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
dfn01005
]
Lipid A
CVE23_18830 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
ATZ95842
UniProt:
A0A2K8QR15
LinkDB
All DBs
Position
complement(4207458..4208390)
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AA seq
310 aa
AA seq
DB search
MRDNTMIKQRTLKRIVQATGVGLHTGKKVTLTMRPAPANTGVIYRRTDLNPPVDFPADAK
SVRDTMLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVVDVDAPEIPIMDGSASPFVYLL
LDAGIEELNCAKKFVRIKQPVRVEDGDKWAELKPFNGFSLDFTIDFNHPVIDAGSQRFKL
DFSADAFVRQISRARTFGFMRDIEYLQSRGLCLGGSLDSAIVVDDYRVLNEDGLRFDDEF
VRHKMLDAIGDLFMCGHNIIGAFTAFKSGHALNNKLLQAVLAKQEAWEFVTFEDEAEMPL
AFKAPSTVLA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcgagataatacgatgatcaaacaacgtacattaaaacgtatcgtacaggcgacaggg
gtcggtcttcataccggcaaaaaagtcaccctgactatgcgtcctgcaccggcgaacacc
ggggtcatctatcgtcgtactgacttgaatccaccggttgattttccggctgatgccaaa
tccgtgcgtgataccatgctctgtacttgcctggttaatgagcatgacgtgcgcatttcg
acggtggagcatctgaatgcggccctggcgggattaggcatcgataacattgttgttgac
gtagatgcgcctgaaattccgatcatggacggcagcgccagtccgtttgtctacctgctg
ctggatgctggtatcgaagaactgaactgtgccaagaagtttgttcgtatcaaacagcct
gtacgcgtagaagacggtgacaaatgggcagaattgaagccgttcaacggctttagcctc
gatttcaccatcgacttcaatcatccggtgattgatgccggttcacagcgcttcaagctg
gatttctccgctgatgcgtttgtgcgccagatcagccgcgcgcggacctttgggtttatg
cgcgatatcgagtatctgcagtcccgcggtctgtgcctgggcggtagtctcgatagtgcg
atcgtggtggatgattaccgtgtgctgaacgaagacggtctgcgctttgacgatgagttc
gtgcgccacaaaatgctggacgcgattggcgacctgttcatgtgtggtcacaacatcatt
ggcgcgttcacggcgttcaaatccggccacgcgttgaacaacaaactgctgcaggctgtg
ctggctaaacaggaagcgtgggaattcgtgacctttgaagatgaagcggaaatgccgctg
gctttcaaagcgccgtcaaccgttctggcctga
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