Dickeya fangzhongdai DSM 101947: CVE23_18880
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Entry
CVE23_18880 CDS
T05277
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Pathway
dfn00300
Lysine biosynthesis
dfn00550
Peptidoglycan biosynthesis
dfn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CVE23_18880
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CVE23_18880
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dfn01011
]
CVE23_18880
Enzymes [BR:
dfn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
CVE23_18880
Peptidoglycan biosynthesis and degradation proteins [BR:
dfn01011
]
Precursor biosynthesis
Amino acid ligase
CVE23_18880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ATZ95852
UniProt:
A0A2K8QR32
LinkDB
All DBs
Position
complement(4219520..4220989)
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AA seq
489 aa
AA seq
DB search
MRDVLAPWVTDAPERALREMTLDSRVAAAGDLFVAIVGHKTDGRHYIPQAIAQGVAAVVA
QADDATPDGTLTEMHGVPVIYLGNLNQRLSALAGRFYRQPSASLQLIGVTGTNGKTTTTQ
LLAQWSQALGKTSAVMGTVGNGLLGHVVPSENTTGSAVDVQQILSQLVEQGADFAAMEVS
SHGLVQHRVEALSFAAAVFTNLSRDHLDYHGDMANYEAAKWRLFAEHQVGQKIINADDNV
GRRWLSRLPEAVAVSVAGKIDAGRAHWLKATRIDYHDSGFTVQFDSNWGAGEINSRLMGE
FNVSNLLLALATLLSLGYSLEQLVKTGSALQPVCGRMEVFLAGGRPTVVVDYAHTPDALE
KALAAARLHCRGVLWCVFGCGGDRDRGKRPLMGAIAEQLADRVIVTDDNPRSEDPQAIVT
DILSGLLDAGRVQVIAGRAEAVTSAVMQAGADDVVLVAGKGHEDYQLVGNERLDYSDRIT
VARLLGVIV
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgatgtcctggctccgtgggtgaccgatgccccggagcgcgcgctgcgggaaatg
acattagacagccgcgtggcggctgccggggatctgtttgtggcgatagtcggccacaag
acggatgggcggcactatattccgcaggctattgcgcagggcgtcgcggcggttgtcgca
caggcggatgatgccacgcccgatggcaccctgactgaaatgcacggcgtaccggtgatt
tatctgggtaacctgaaccagcgtttatccgcgctggcagggcgcttttatcgccagcca
tcggcctcgttgcaactgatcggcgttaccggcaccaacggcaagaccaccaccacccag
ttgctggcgcagtggagtcaggcgctgggcaaaaccagcgcggtgatgggcaccgtcggc
aacggcttgctggggcatgtggtgccgtcggaaaacactaccggttcggcggtggatgtg
cagcagatcctgagtcagttggtggagcaaggggcggatttcgccgccatggaagtgtct
tcgcatgggctggtgcagcaccgggtggaggcgctgtcgttcgccgccgcggtatttacc
aacctgagtcgcgatcatcttgattatcacggcgacatggcgaattacgaagcggccaaa
tggcggctgttcgccgagcatcaggtcgggcagaaaatcattaacgccgatgacaacgtt
ggccgtcgttggttaagccgcctgccggaagcggtggcggtgagcgtggcgggcaagatc
gatgccggccgggcgcactggctgaaagccacccgtatcgattatcacgacagcggtttc
accgtgcaattcgactccaactggggcgccggtgagatcaatagccgcctgatgggcgag
ttcaacgtcagtaacctgttgctggcgctggcgacgctgttgtcgctgggctattcgctg
gaacagctggtgaagaccggctctgcgctgcagccggtctgcggtcgaatggaagttttt
cttgccggcggccggccgacggtggtggtggattacgcccatactccggacgcgctggaa
aaagcgctggcggcggcgcgtttgcactgccggggcgtactgtggtgcgtattcggttgc
ggtggcgatcgcgacagaggtaagcgcccactaatgggcgcgattgcggaacagctggcg
gatcgggtgattgttaccgacgataacccgcgcagcgaagacccgcaggcgattgtgacc
gatatcctgagcggattgctggatgcgggccgggtgcaggtgattgccggtcgggcggaa
gccgtcaccagcgcggtgatgcaggctggcgccgatgatgtggtgctggtcgcaggcaaa
ggacacgaagactatcagttggtaggaaatgagcggttggattattcggatcgcattact
gtcgcgcgtctgctgggggttatcgtatga
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