Dyadobacter fanqingshengii: NFI81_09055
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Entry
NFI81_09055 CDS
T08895
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
dfq
Dyadobacter fanqingshengii
Pathway
dfq01501
beta-Lactam resistance
dfq01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dfq00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NFI81_09055
01503 Cationic antimicrobial peptide (CAMP) resistance
NFI81_09055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dfq02000
]
NFI81_09055
01504 Antimicrobial resistance genes [BR:
dfq01504
]
NFI81_09055
Transporters [BR:
dfq02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NFI81_09055
Antimicrobial resistance genes [BR:
dfq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NFI81_09055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
OmcA-like_N
Motif
Other DBs
NCBI-ProteinID:
USJ37919
LinkDB
All DBs
Position
complement(2216399..2219548)
Genome browser
AA seq
1049 aa
AA seq
DB search
MFNRFIDQPVLSTVISVLIVILGVLGLISLPIAQYPEIAPPTVVVSTSYQGANADVVLNS
VIVPLEEQINGVEDMTYMTSSAGNDGTARITINFKLGTNPDLASVNVQNRVARATALLPQ
EVTRSGVTTAKSQSSNLVIFSLYSENPAYDQTFLQNYAEINLVPLIKRVSGVGEANAFGR
MDYSMRIWLKPDVMATYGLVPSDVSTALAEQNIEAAPGQFGEQGLQSFQYVIKYSGRLKD
AGEFEEVVIKATPSGQVLRLKDIARVELGAMSYASSTTTNSNPSVGVSISQTAGSNAKEV
IEGSLQVLDNAAKSFPSGIKYVTLINANDFLDASIEKVIHTLIEAFILVFLVVFIFLQDF
RSTLIPAIAVPVAILGTFFFLLLFGFTINLLTLFALVLAIGIVVDDAIVVVEAVHAKLDE
GYTSALKATKDAMSEISGAIISITLVMAAVFLPVSFIEGSSGVFYKQFGLTLAIAIMLSA
VNALTLSPALCAIFLKPHKEDTSHKKNILQRVYGWFNRTFDKTIQRYKQAVSFLIAKKWV
AGLIIAVFAGLFYYLMQTTPSAFVPNEDTGSIMADIALPPSASTERTEAIMKQVEAIARS
IPEVQNILKITGRGMISGVGSNYGMVVMRLKPWSERGGEGQDVQALIGKLFAKTGGIRDA
KIIFFAPPTISGFGSSGGFEFQLQDKSGSDIALFSKIGNDFLAALSKRPEIQYASTAFNV
NFPQYQIDVNVAKAKVAGITVNDIMSTMQGYYGGVYASNFNQFGKQFRVMYQAEAASRAN
PEGLSNIYVRNANGQMAPITGFITMKRVYGPQSISRFNLFTSIGVTGSPNPGFSSGDAIA
AIQQVAAEVLPQGYGYEFSGMTREEISAGGQTVFVFMLVIVFVYLLLSAQYGSYILPFAV
LLSLPIGLAGTFLFASLFGITNNIYLQITLVMLIGLLAKNAILIVEFAVERRRHGMSLVE
AAVEGAQARLRPILMTSFAFILGLVPLMLSTGAGAIGNRSIGTGAVGGMLVGTLIGVFVI
PVLYIVFQSLQEMISGPPKPITEQVQDDH
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatcgattcattgatcagccagtactgtctacagtcatttccgttcttattgtc
atccttggtgtattggggctaatttccctgcctattgcgcaatatcctgagatcgctccg
cctactgtcgttgtctccacatcatatcagggtgccaatgcggatgtggtgcttaatagc
gtgattgtgccattggaagaacagatcaacggcgtggaggacatgacttacatgacatct
tcggctgggaatgatggcacagcgcggattacaatcaactttaagctaggcacaaacccc
gaccttgcatctgtaaatgtgcagaatcgcgtcgcgcgggcaactgcgctcttgccgcag
gaagtcacgcgctccggtgtaacgacggccaaaagccaaagcagtaaccttgtgattttt
tccttatacagcgagaatcccgcctatgatcagacatttttgcaaaactatgcggagata
aacctggtgcccttaattaagcgcgtatcaggggttggagaggcgaatgcgttcggacgt
atggattattccatgcggatctggttgaaaccggatgtgatggcaacttatgggcttgtc
ccttcggatgtcagcactgcactggcagagcaaaatatagaggctgcccccggtcagttc
ggtgaacagggcttgcaatcctttcagtacgtgatcaagtattcgggcaggctcaaagat
gcaggcgagtttgaagaagtggtcatcaaggccacgccaagtggtcaggtattacggctc
aaagacattgcccgcgtggagctgggcgctatgagctatgccagcagtacgacaaccaat
agcaacccctcggtaggtgtatccatcagccaaacagcgggctccaatgccaaggaagtg
attgaaggaagtttgcaggtattggataatgccgccaaatcgttcccttccggtattaag
tacgtcacgctgatcaatgcaaacgattttctggatgcatccattgaaaaggtgatccat
acgctcattgaagcattcattctggtgtttttagtagtttttattttcctgcaagatttt
cggtctacgcttattcccgctattgctgttccggtggctattctgggcacttttttcttt
ctgctgctttttgggttcacgattaaccttttgacattgtttgcattggtcttggccatt
gggattgtcgttgatgatgccatagtcgtggtggaagccgttcatgctaaactggacgag
ggatacacatccgcgctcaaagccacaaaagacgccatgagtgaaatttcgggagccatc
atctcaatcacccttgtgatggcggcggtatttctgccggtaagttttatcgaaggctca
tccggggtgttttacaaacaatttggcttgacgctcgccattgcgattatgctctctgct
gtcaatgcactcacgctcagtcctgcattgtgcgctatatttttaaaaccgcataaagaa
gatacaagccataaaaagaacattttacaacgtgtttatggctggttcaaccgcacattt
gacaagacaatccagcgctacaaacaagccgtttcattcctgattgcgaagaagtgggtt
gcgggattgatcattgccgtgtttgccggcctgttttattatctgatgcaaaccacccct
tctgcattcgtgcctaatgaagatactggctctatcatggctgatattgccctgccacct
tcggcatcgacggaaagaacagaggccatcatgaagcaagtcgaggcaattgcgcgttcg
atcccggaagtacagaatatattaaaaattacaggtagagggatgatcagcggagttgga
agcaactatgggatggttgtaatgcggctgaaaccctggtctgagcgtggaggggaagga
caggatgttcaggctttgattggaaaattatttgcaaaaacaggcgggatcagggatgcc
aagatcatcttttttgcacctccgaccatttcagggtttggctcatcgggcgggtttgag
tttcagctgcaagacaaaagtggaagtgacattgccctattctctaaaattggcaatgat
tttctggcagcattaagtaagcggcctgaaattcagtacgcgtccactgcattcaatgtg
aattttccgcagtatcagatcgatgtgaatgtggccaaggcaaaagtggcaggcatcact
gtcaatgacatcatgagcacgatgcagggctattacggcggcgtgtatgcatctaatttc
aatcagtttggtaaacaattccgggtcatgtaccaggccgaggctgcttcgcgggctaat
cccgaagggctcagcaacatttatgtccgcaatgcaaacggccagatggcgcctattacg
ggctttatcaccatgaagagagtgtatgggcctcagtcaatttccaggtttaatttattt
acttctattggtgttaccggttcgcccaatccagggtttagctcaggcgatgccattgcg
gccattcagcaagtggctgctgaggtacttccacaaggatatggatatgagttttcaggg
atgaccagggaagagatttctgctggcgggcagaccgttttcgtcttcatgctggtcatc
gtttttgtctatttgctgcttagcgcacagtatggaagctatatattgcctttcgcggtg
cttctttcccttccgatcggattggcaggcacattcttattcgccagcttatttggtatc
accaacaatatttatctgcaaatcacactggtcatgctgatagggcttttggcaaagaat
gcaattctgattgtcgaatttgcagtggaacgtaggcggcatgggatgtcgctggtggaa
gcggctgtcgaaggtgcacaggcacggttgcgtccgatcctgatgacctcttttgctttt
attctgggtttggttccactcatgctttcaaccggcgcaggtgcaattggaaaccgctcc
attggaactggtgccgtaggaggaatgctggtaggaacgctcattggggtttttgtgata
ccggtgctttatatcgtattccagtctttacaagaaatgatcagcggtccgcccaagcca
attacagaacaagttcaggacgatcattga
DBGET
integrated database retrieval system
