Dyadobacter fanqingshengii: NFI81_09060
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Entry
NFI81_09060 CDS
T08895
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
dfq
Dyadobacter fanqingshengii
Pathway
dfq01501
beta-Lactam resistance
dfq01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dfq00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NFI81_09060
01503 Cationic antimicrobial peptide (CAMP) resistance
NFI81_09060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dfq03036
]
NFI81_09060
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dfq02000
]
NFI81_09060
01504 Antimicrobial resistance genes [BR:
dfq01504
]
NFI81_09060
Chromosome and associated proteins [BR:
dfq03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NFI81_09060
Transporters [BR:
dfq02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NFI81_09060
Antimicrobial resistance genes [BR:
dfq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NFI81_09060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
HH_MFP_RND
BSH_CusB
Beta-barrel_RND
YknX_C
HH_EMRA
BSH_YknX
BSH_CzcB
RND-MFP_C
Biotin_lipoyl
HH_AAEA_pHBA
HH_YBHG
Beta-barrel_RND_2
HH_AprE
BSH_YhbJ
Motif
Other DBs
NCBI-ProteinID:
USJ37920
LinkDB
All DBs
Position
complement(2219552..2220715)
Genome browser
AA seq
387 aa
AA seq
DB search
MNQRIQLSLTGLSLTFVLFLSCQDKKQGSGNVAEQIKDYPVLTITQRTITLNSEFPATIE
GQQDIEIRPKIDGFIEKIFVDEGATVKKGQALFKINAPQYEQEVRTAQANIKIAEADVNA
AQMGVNKVKPLVEKNIISKYELESAQFTMQAKQAALAQAFAALSNARTNLGYTTIASPAN
GIVGLIPYKIGSLVNSNTPEPLTTVSNIGNIYAYFSINEKQVLAFSKNTKGNTTKARIAT
MPSVSLVLANGAVFAEKGRITTTSGSINTETGSIRVRATFPNPGSIIRSGSSATVRIPSR
LDSAIVIPQKSTYEIQGKKFVYRVSADGTVKSAEVGVLDNNDGQFFVAQTGLAVGDKIIL
EGVASLREGAKVISRPVKADSIYAKNL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaggatacagctctcactaactggtttgtcattgacgttcgtccttttcttg
tcctgtcaggacaaaaagcagggcagtgggaatgtggcggagcaaatcaaggactatccg
gtcctgacgattacacaaagaacgatcacattaaatagcgaattcccggcaaccatcgaa
gggcagcaggatattgagatccgtccgaaaattgatggatttatagaaaagattttcgtt
gatgaaggtgctactgtgaaaaaagggcaagcgctgtttaaaatcaatgcccctcaatat
gaacaggaagtaaggactgcacaggccaatattaaaatcgcagaagcagacgtcaatgcc
gcgcaaatgggtgtcaataaggtgaagccattggtcgaaaagaacattatcagtaaatac
gaacttgaatcagcgcagtttaccatgcaagcaaaacaagcggcgctggcacaggctttc
gctgcgctttccaatgcgcgtaccaatttgggctatactaccattgcaagccctgcaaat
ggcattgttggcttaattccttataaaatcggcagccttgtcaatagtaatacacccgaa
ccattaaccacagtttcaaacattggcaacatatacgcctatttctcgatcaatgaaaaa
caggttttagcattctccaaaaacacgaagggcaatacaacgaaagcccggatcgcgaca
atgccatctgtatccctggttttagcgaatggagccgtttttgctgaaaaaggccggatt
acaacgaccagcggttctatcaatacagagacaggctccattagggtgcgggcaactttt
ccaaatcccggaagtattatacgcagtgggagcagtgctactgtccgcattccttcccgg
cttgattcggccattgtcatcccgcaaaagtcgacctacgaaatacaagggaaaaagttt
gtgtaccgtgtttcggcagacggcaccgttaagagtgcggaagttggcgtgctggacaat
aatgatggacagttctttgttgcccaaaccggccttgccgtaggggacaagattatcctg
gaaggggtagcgtcgttacgggaaggggcaaaggtcatttccagaccagtaaaagcggac
agtatttacgccaaaaacttgtag
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