Dyadobacter fanqingshengii: NFI81_22815
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Entry
NFI81_22815 CDS
T08895
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
dfq
Dyadobacter fanqingshengii
Pathway
dfq01501
beta-Lactam resistance
dfq01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dfq00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NFI81_22815
01503 Cationic antimicrobial peptide (CAMP) resistance
NFI81_22815
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dfq02000
]
NFI81_22815
01504 Antimicrobial resistance genes [BR:
dfq01504
]
NFI81_22815
Transporters [BR:
dfq02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NFI81_22815
Antimicrobial resistance genes [BR:
dfq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NFI81_22815
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
MMPL
BSH_CzcB
YknX_C
Beta-barrel_RND_2
BSH_CusB
BSH_RND
BSH_YknX
HH_MFP_RND
Motif
Other DBs
NCBI-ProteinID:
USJ35508
LinkDB
All DBs
Position
complement(5449564..5453922)
Genome browser
AA seq
1452 aa
AA seq
DB search
MYQLIRTALRQPISIMVVVIGILFFSILSIRSIPVDIFPNLDLPTIYVVQPYGGMAPDQM
DGFIATRYQDHFLYVSGIRDVDVKTIQGLSLIKLSFYPGTDMAQAAAEVANNVSRAKAYM
PEGTVPPQVVRFDASSVPIGQMVFESSSRSLNEIQDFASSRVRPMFSRIEGVSSPPPFGG
NQRTIVIRVDPERIRSYHLTPEEIIKSIITNNQPSPAGNIRIGDRTLMTPVNSLIKKPED
FLNIPIRTGAGPTVFIRDVGTVEDGADVTVSYALINGRRAVYIPVVKKSDASTLDVVNNI
RAALPQLRNAVPEDVKISYEFDQSVYVTNSLKSLVTEGILGALLTGLMVLLFLRDWRSVI
IVIVTIPISILSAVILMNLFGQTINIMTLSGLALAIGVLVDQATVTIENIHQHQEMGKPK
EQAIWDACKEIAFPEFLILLAILAVFAPSFVMSGIPRSMFLPLSLAVGFAMIASFLLSQT
LVPVLANWLLKDNPHHEGPTLALDKREIDNVIKEGAHPSLPVKGFEKFKLKYIDFLSGIM
RKGKLVVPVYLVAAVVLIVGGFFLIGTDILPKANSHQFQMRLRIADGTRVERTEQATLKV
LDLIKSEVGKEHVEISSAYVGTVPSSYGTSNIFVFNSGPHEAVLQVSLHEDFPVKMDALK
EKLRERIGKEIPSLKISFEPIELVDKIMSQGASTPIEVSVAAKDVEEAGRFAKKIQKEMQ
HIAFLRDVQIAQPLDYPVLNVEINRERAGQLGITSTQVARSMVAATSSSRFTDKNLWLDD
AKGLAYQVQVQIPEYQMTSIEDIGTIPLKTGVSNPLLADVATFSEKTAPGEYDRAGPNRL
VTVTANIHKKDLGAATKAVETAIKDAGEPPRGVLVELKGQSDLLTETLGSLQVGLVIAIV
IMFMLLSATYQSFKLSLVVLSTIPAVVVGSIGLLLLSGATLNLQSYMGLIMSVGVSVANA
ILMVTNAENLRLQLNDSYKAVILAAGSRIRPILMTSIAMIAGMIPMASGLGEGGDQIAPL
GQAVIGGLIASTLASLLILPAVFTMVKRKASIQSLSLDPEDPESNFFRNKLQTSISMNTL
KSLIIVGTMTFGIMSCNSEAETTDGKAQKEEQAPATEMAVVQSLKPGKQLALPGELKPWN
KVSIYPKVKGFVKTVNVDRGTMVRKGQILATLEAPEVLSELSQAKAQLIASEAALHESTT
RFQTSSLTYNRLLRTSKTEGAVSLNELDLAKARSVTNSSAVAMAQGNVQAARSYMETKSQ
LAKYLTVAAPFDGIITERNISPGALVGPGESGAKPLFVLEDNTKLRLTLAIPENVSNAVP
SKGEISFTVSASPEKQYKGVYARSSRTLTEENRSMMTEFDVDNRSNELKAGMYAQVMLNT
SRTANTLFVPTSAVVYSSEQVFVIREKDKKAEWVPVKRGTVVDTLVEVFGNLHAGDSIVK
KASEEFRNGEAL
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaactcattagaaccgcactgcggcagcctatttccattatggtggtggtgatc
ggaatcctgttcttttccattttatccatccgcagcattcctgtcgacattttcccaaac
ctggatttacccaccatttacgtggtgcagccttacggtggtatggcgcccgatcagatg
gacggcttcattgcgacccgttaccaggatcactttctgtacgtttccggcatccgggat
gtggatgtgaaaaccattcagggactttcgctgatcaaactttcgttttatcccggaacc
gatatggcgcaggcggctgcggaagtggcgaataatgtttcgcgggcaaaagcttacatg
cccgaaggaaccgttcctccgcaagtggtccgttttgacgccagttctgtccccatcggg
caaatggtttttgaaagctcatcccgctccttgaacgagatccaggattttgcatcttcc
cgcgtgcggccgatgttcagccgcattgaaggcgtttccagtccgccgccattcggtggt
aaccagcgtaccattgtcattcgcgttgatcctgaacgcatcagaagttaccatttgacg
cccgaggaaatcattaaatccatcattaccaacaaccagccatcacccgcgggtaacatc
cgcataggcgaccggacattaatgacaccggttaactcattgatcaaaaaaccagaagac
tttctcaacattcccatccgcaccggcgcaggccctactgtgtttattcgcgatgtaggc
acggtggaagatggtgccgatgtcacggtgagttatgccttgatcaacggccgccgcgcg
gtttatatcccggtggttaaaaaatcagatgcttctacgctggatgtagtgaataatatc
agggctgcattgccgcaattaaggaatgccgttcccgaggatgtgaagatctcctatgag
tttgaccaatcggtttatgtgaccaattcgctgaaaagtttggtcacggaaggaatttta
ggagccttactaaccggtttgatggtgcttttgttcttgcgtgactggcgcagtgtgatc
atcgtaattgtcaccattccgatctcgattttatccgccgtcattctgatgaatctgttt
ggccaaactattaacattatgacattgagcggcttagcattggctattggtgttttggtg
gatcaggcgacggttacgattgagaacattcaccagcatcaagaaatgggtaagccgaaa
gaacaagccatttgggatgcttgtaaggaaattgctttcccggaatttctgatcctgcta
gccattcttgctgttttcgcaccgtcgtttgtcatgagcggcattccgagatccatgttt
ttgccgctgtcactggccgttggttttgccatgatcgcgtcatttttattgtcccaaaca
ttggttccggttttggcaaactggctgctgaaagataatccgcatcacgaagggccaaca
ctggctttggataagcgggaaattgataatgtgatcaaagaaggtgcgcatccgtctttg
ccagttaagggttttgagaaatttaaattaaaatacattgatttcctgagcggcattatg
cgaaaagggaaactcgtggttcctgtttatctcgtcgccgcggttgtattgatcgtcggt
ggatttttcctcattggaactgatattttaccaaaagccaatagtcaccagtttcaaatg
cgtctgcgcattgcggacgggacgcgcgtagaacgcaccgagcaagccacattgaaagtg
cttgatctgatcaagtcggaagtgggtaaggaacatgttgagatttcgtcggcatatgtt
ggaacggtgccatccagttatggaacgtctaatattttcgtgttcaacagcgggccgcat
gaggctgttttgcaggtttcgttacacgaagattttcctgttaaaatggacgcattgaaa
gaaaaattgcgggaacgcattggtaaggaaattccttcgctgaaaatttcttttgaaccc
attgagctggtggataagatcatgagccagggcgcatccactccgatcgaggtgagcgtt
gctgcgaaggatgttgaagaagcaggacgatttgcaaagaagatccagaaagaaatgcag
cacattgcattcctgcgagatgttcaaattgcgcagccgttggattatcctgtactgaat
gtggagatcaaccgcgaacgggctggccagcttggcatcacttccacgcaagtggccaga
tccatggtggcggcgacttcatcaagccgttttacggataaaaacctttggctggatgat
gcaaaagggcttgcatatcaagttcaggttcagattcctgaatatcaaatgacctcaata
gaagacattggaacaattcccttgaaaaccggcgttagcaatcccctattggctgatgtg
gccacattttccgaaaaaacggctcccggcgagtacgatcgcgctggcccgaaccgactc
gtgacggtgactgccaacattcataaaaaggatttaggcgcagccacaaaagcagttgaa
actgccataaaggatgccggagagcctccgcgtggtgttttggttgagctaaaaggccag
tctgacttgctgaccgagacattaggaagcttgcaggttggtttggtgattgccattgtg
atcatgttcatgttgctttccgccacttaccaatcattcaaattgtcgcttgtcgtcctt
tcgaccattccagcagtggttgtcggctcaattggcctgcttcttctgagtggggcaaca
ttgaatttgcaatcttatatgggcttgattatgtccgtgggggtttcggtggcgaatgcc
attttaatggttaccaatgcagaaaaccttcgtttgcagctgaacgactcctataaggcg
gtgattttggcggccggaagtcgaataaggccaattttgatgacgagtatcgcgatgatt
gccggaatgatcccaatggcgtccggcttaggcgagggcggcgaccagattgctccgctg
gggcaagccgtgatcggcggattgatcgcatcaacattagcttctctgctcattcttccg
gctgttttcacaatggtcaaaagaaaagcttccattcaatcactatcgctcgatccggaa
gaccccgaaagcaattttttccgaaataaacttcaaacttccatttccatgaacaccctg
aaatcgttaatcatcgttggaacaatgacatttggcattatgtcctgcaattccgaagct
gaaacaactgatggcaaagcgcaaaaagaagagcaggcgccggcaaccgaaatggcggtt
gtgcaaagtctgaaaccgggcaagcaactcgcattacccggcgaattgaagccgtggaac
aaggtcagcatttatccgaaagtgaagggatttgtgaaaaccgtaaatgtggatcgcgga
acaatggtgcggaaaggacagattctcgctacgctcgaagcgcctgaggttttgtcagaa
ctaagccaggccaaagcgcagctgattgcctcagaagccgcattgcatgaaagcaccacc
cgttttcaaacaagttcgctcacttataaccgtttgctgcgcaccagcaagaccgaaggg
gcagtttcgctaaatgaactggatttggcaaaagccaggtctgttacgaacagttcggcg
gtggccatggctcagggaaatgtgcaggctgcgcgctcttatatggaaacaaaatctcaa
ctggctaaatatctgactgttgcagcaccttttgacggaattattacagagcggaatatc
agtcctggtgcattggtaggccccggagaaagcggtgcgaagcctttatttgtgttggaa
gataataccaaattgaggttaaccctggccattccagaaaacgtatccaacgcagttccg
tcaaagggcgagatcagtttcacagtgtcggcaagccctgaaaagcaatacaaaggtgtt
tatgccagaagttccaggacattaaccgaagaaaaccgctccatgatgacagaatttgac
gttgataatcgttcaaacgagctcaaagcaggcatgtacgcgcaagtaatgttgaacaca
tcccgcaccgccaacacattgtttgtgccgacttcggcggttgtttattccagcgaacag
gtttttgtaatccgggaaaaagataaaaaagcagaatgggttcctgtaaaaagaggaacc
gtggtagatacgctggtagaagtcttcggcaatctccacgcaggcgactcgatcgtgaag
aaggcttcggaggagtttaggaacggggaggctttataa
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integrated database retrieval system
