Dermatophagoides farinae (American house dust mite): 124491509
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Entry
124491509 CDS
T08043
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124491509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dfr03041
]
124491509
Spliceosome [BR:
dfr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
124491509
Complex C
U5 SnRNP specific factors
124491509
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Motif
Other DBs
NCBI-GeneID:
124491509
NCBI-ProteinID:
XP_046910123
LinkDB
All DBs
Position
2:complement(3084848..3088513)
Genome browser
AA seq
1010 aa
AA seq
DB search
MDETQEIKTTTYQYFFFKSEFSSVINKKKMDLYDEFGNYIGPDLESDNEEEENDYSQFNV
QDDDDDDDGDDMDQNNELMTIDKNNEDDDDDEQMQVVLHEDKKYYPTAEEVYGQEVETIV
QEEDTQPLTKPIIDPVKNKKFSYQMKELPLTTYDLEFMTDLMDNPNLIRNVAFIGHLHHG
KTSFVDCIIEQTHPELSNRKDDKPFRYTDILYTEQERGVSIKSTPITVVMQDLKSKSYLM
NFFDTPGHVNFSDEVTAAIRLCDGVILFVDAAEGVMLNTERLLKHALQENLTIAVCINKI
DRLILELKLPPQDAYYKIRHILDEINGIIKTHCNLSEPPLISPLLNNVCFSSSLYNICFT
LKSFAQLYASYYPGVDYMEFSKRLWGDIYFNRTSRKFVKKAPTGQTQRTFIEFILEPLYK
IVSQIVGDADGNLAKVLDELGIKVSKSEMKLNIRSLMRLICSRFFGDFNCLIDICVNVIP
SPIENALKKVQHIWKGPIESPLAESMIECDQKGSLVIHTTKQYSSQDGTAFNVFGLVLSG
TLEAKQSVKILGENYSSFDEEDSRIMSVGKLWISEGRYTIEVNRVPAGNWVLIEGIDQPI
SKTSTIVDARYDDELFIFNPLKFNTQSVIKIAVEPVVPSELPKMLEGLRKCNKSYPLLGT
RVEESGEHIILGTGELYLDCVMHDLRKMYSEIDIKVADPVVSFCETVVETSQIKCFAETS
NKKNKIMMIAEPLEKGLAEDIENEIVQIGWNRKKLGEFFQTKYDWDILAARSIWAFGPSN
TGPNILVDDTLPSEVDKNLLNTVRDSIVQGFQWASREGPLCEEPIRNVKFKILDAIISPE
PAARGGGQIIPTARRVAYSSFLMATPRLMEPYYFVEALAPADCVSAVYTVLAKRRGHITQ
DVPVPGSPLYTVKAFIPAIDSFGFETDLRTHTQGQAFCLSVFHHWQIVPGDPLDKSIIIR
PLEPQPAPHLAREFMIKTRRRKGLSEDVSINKFFDDPMLLELAKQDVLLS
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaacacaagagattaaaacgactacataccaatattttttttttaaatcggaa
ttttcctcagtaattaataaaaaaaaaatggatctttatgatgaatttggcaactatatt
ggaccggatttagaatcagacaatgaagaagaagaaaatgattattctcaatttaatgtc
caagatgatgatgatgatgatgacggtgatgatatggatcagaacaatgaattgatgaca
atcgataagaataatgaagatgatgatgatgatgaacagatgcaagttgttttgcatgaa
gacaaaaaatattatcccactgccgaagaagtgtatggccaagaagttgaaacgattgtt
caggaagaagatacacaaccattaacaaaaccgattatagatccagtcaagaataaaaaa
tttagctatcaaatgaaagaattgcctttgacgacttacgatctagaatttatgaccgat
ttgatggacaatcctaatttaattcgtaatgttgctttcatcggccatcttcatcatggt
aaaacatcttttgttgattgtattatcgaacaaacacatcccgaattgagtaatcgaaaa
gacgataaaccgtttcgatacaccgacattctatatacggaacaagaacgaggagttagc
ataaaatccacaccaataaccgtggtcatgcaagatctcaaatccaaatcctatcttatg
aattttttcgatacacctggtcatgtcaatttttcagacgaagtaacagcagctattcgt
ctttgtgatggtgtcattctgtttgtagatgctgctgaaggtgttatgctcaacactgaa
cgtttattgaaacatgcattgcaggaaaatcttaccatagctgtatgcataaataaaatc
gatcgtcttatactggaattgaaacttccgcctcaagatgcttattataaaattcgtcat
atattagacgaaatcaatggcattattaaaacacactgtaatttatcggaacctccattg
atatcgccacttttgaacaatgtttgtttttccagttcactatataatatctgtttcact
ttgaaatcctttgcccaattatacgcttcttattatcctggagtggattatatggagttt
tccaaacgtctttggggcgatatttattttaaccgtacaagccggaaatttgtgaaaaaa
gcgccaacaggacaaactcaacgaacttttatcgaattcatcctggaacccttgtataaa
attgtatcacagatcgttggcgatgctgatggaaacttggcaaaagttctcgatgagctt
ggtatcaaagtttctaaaagtgaaatgaaactcaacatacggtcactaatgagattaatt
tgctctcgatttttcggcgatttcaattgtcttattgatatttgtgttaatgtaattcct
tctcctattgaaaatgccctgaagaaagttcaacatatttggaaaggtccaatagaatct
ccattggccgaatcaatgatcgaatgtgatcagaaaggatcattggttatacatacaact
aaacaatattcttcccaagacggcacagcttttaatgtatttggtcttgttctcagtgga
acacttgaggctaaacaaagcgtgaaaattcttggtgaaaattactcttcattcgatgag
gaagattcacgaatcatgtcggttggaaaactttggatttctgaaggtcgatataccatt
gaagttaatcgagttccagcgggtaattgggttctgattgaagggatcgatcagccaata
tcgaaaacttcaaccatagtagatgctagatatgacgatgaacttttcattttcaatcca
ttgaaattcaatactcaatcagtcataaagattgctgtcgaacctgtcgtcccatctgaa
ttgccaaaaatgttggaaggtttgagaaaatgtaataaatcatatccattattgggaact
cgggtagaagaaagtggagaacatattattcttggaaccggagagttgtatctggattgt
gtgatgcatgatttgcgcaaaatgtattcagaaatcgatattaaagttgccgatcctgtc
gtctctttttgtgaaacggtcgtagaaacttcacagattaaatgctttgccgaaacttca
aataaaaagaataaaataatgatgattgcagaaccacttgaaaaaggattagctgaagat
attgaaaatgagattgtacagatcggttggaatcgtaaaaaattgggagaattttttcaa
acgaaatatgattgggatattcttgctgcacgatcaatatgggcttttggtccaagtaac
actggaccaaatatattggtcgatgatactttaccatctgaagtggataaaaatttgtta
aatactgtacgcgattctattgttcagggctttcaatgggcatcgagagaagggccatta
tgtgaagaaccaattcgaaatgttaaatttaaaattctcgatgctatcatcagtccggaa
ccggctgccagaggaggtggacaaattattccaactgctcgtcgtgttgcctattcctct
tttttaatggctacaccacgacttatggaaccatattattttgtcgaagctctagcaccg
gctgattgtgtatcagctgtttatacggttttagcgaaacgtcgtggccacataactcaa
gatgtaccagttcctggttcgccattgtacactgtaaaagcttttattcctgcaatagat
tcttttgggtttgaaacggatctacgaacacatacacaaggccaagcattttgtttatca
gtatttcatcattggcagattgttcctggcgatccattggacaaatcgattatcatacga
ccattagaaccacaaccggcaccacatttagccagagaatttatgatcaaaactcgtcgc
cgtaaaggtttatccgaagatgttagtatcaataaatttttcgatgatccgatgctactc
gaattagccaaacaagatgtactactgtcttaa
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