Dermatophagoides farinae (American house dust mite): 124491509
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Entry
124491509 CDS
T08043
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component-like
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
dfr
Dermatophagoides farinae (American house dust mite)
Pathway
dfr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dfr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124491509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dfr03041
]
124491509
Spliceosome [BR:
dfr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
124491509
Complex C
U5 SnRNP specific factors
124491509
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Motif
Other DBs
NCBI-GeneID:
124491509
NCBI-ProteinID:
XP_046910123
LinkDB
All DBs
Position
Unknown
AA seq
981 aa
AA seq
DB search
MDLYDEFGNYIGPDLESDNEEEENDYSQFNVQDDDDDDDGDDMDQNNELMTIDKNNEDDD
DDEQMQVVLHEDKKYYPTAEEVYGQEVETIVQEEDTQPLTKPIIDPVKNKKFSYQMKELP
LTTYDLEFMTDLMDNPNLIRNVAFIGHLHHGKTSFVDCIIEQTHPELSNRKDDKPFRYTD
ILYTEQERGVSIKSTPITVVMQDLKSKSYLMNFFDTPGHVNFSDEVTAAIRLCDGVILFV
DAAEGVMLNTERLLKHALQENLTIAVCINKIDRLILELKLPPQDAYYKIRHILDEINGII
KTHCNLSEPPLISPLLNNVCFSSSLYNICFTLKSFAQLYASYYPGVDYMEFSKRLWGDIY
FNRTSRKFVKKAPTGQTQRTFIEFILEPLYKIVSQIVGDADGNLAKVLDELGIKVSKSEM
KLNIRSLMRLICSRFFGDFNCLIDICVNVIPSPIENALKKVQHIWKGPIESPLAESMIEC
DQKGSLVIHTTKQYSSQDGTAFNVFGLVLSGTLEAKQSVKILGENYSSFDEEDSRIMSVG
KLWISEGRYTIEVNRVPAGNWVLIEGIDQPISKTSTIVDARYDDELFIFNPLKFNTQSVI
KIAVEPVVPSELPKMLEGLRKCNKSYPLLGTRVEESGEHIILGTGELYLDCVMHDLRKMY
SEIDIKVADPVVSFCETVVETSQIKCFAETSNKKNKIMMIAEPLEKGLAEDIENEIVQIG
WNRKKLGEFFQTKYDWDILAARSIWAFGPSNTGPNILVDDTLPSEVDKNLLNTVRDSIVQ
GFQWASREGPLCEEPIRNVKFKILDAIISPEPAARGGGQIIPTARRVAYSSFLMATPRLM
EPYYFVEALAPADCVSAVYTVLAKRRGHITQDVPVPGSPLYTVKAFIPAIDSFGFETDLR
THTQGQAFCLSVFHHWQIVPGDPLDKSIIIRPLEPQPAPHLAREFMIKTRRRKGLSEDVS
INKFFDDPMLLELAKQDVLLS
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggatctttatgatgaatttggcaactatattggaccggatttagaatcagacaatgaa
gaagaagaaaatgattattctcaatttaatgtccaagatgatgatgatgatgatgacggt
gatgatatggatcagaacaatgaattgatgacaatcgataagaataatgaagatgatgat
gatgatgaacagatgcaagttgttttgcatgaagacaaaaaatattatcccactgccgaa
gaagtgtatggccaagaagttgaaacgattgttcaggaagaagatacacaaccattaaca
aaaccgattatagatccagtcaagaataaaaaatttagctatcaaatgaaagaattgcct
ttgacgacttacgatctagaatttatgaccgatttgatggacaatcctaatttaattcgt
aatgttgctttcatcggccatcttcatcatggtaaaacatcttttgttgattgtattatc
gaacaaacacatcccgaattgagtaatcgaaaagacgataaaccgtttcgatacaccgac
attctatatacggaacaagaacgaggagttagcataaaatccacaccaataaccgtggtc
atgcaagatctcaaatccaaatcctatcttatgaattttttcgatacacctggtcatgtc
aatttttcagacgaagtaacagcagctattcgtctttgtgatggtgtcattctgtttgta
gatgctgctgaaggtgttatgctcaacactgaacgtttattgaaacatgcattgcaggaa
aatcttaccatagctgtatgcataaataaaatcgatcgtcttatactggaattgaaactt
ccgcctcaagatgcttattataaaattcgtcatatattagacgaaatcaatggcattatt
aaaacacactgtaatttatcggaacctccattgatatcgccacttttgaacaatgtttgt
ttttccagttcactatataatatctgtttcactttgaaatcctttgcccaattatacgct
tcttattatcctggagtggattatatggagttttccaaacgtctttggggcgatatttat
tttaaccgtacaagccggaaatttgtgaaaaaagcgccaacaggacaaactcaacgaact
tttatcgaattcatcctggaacccttgtataaaattgtatcacagatcgttggcgatgct
gatggaaacttggcaaaagttctcgatgagcttggtatcaaagtttctaaaagtgaaatg
aaactcaacatacggtcactaatgagattaatttgctctcgatttttcggcgatttcaat
tgtcttattgatatttgtgttaatgtaattccttctcctattgaaaatgccctgaagaaa
gttcaacatatttggaaaggtccaatagaatctccattggccgaatcaatgatcgaatgt
gatcagaaaggatcattggttatacatacaactaaacaatattcttcccaagacggcaca
gcttttaatgtatttggtcttgttctcagtggaacacttgaggctaaacaaagcgtgaaa
attcttggtgaaaattactcttcattcgatgaggaagattcacgaatcatgtcggttgga
aaactttggatttctgaaggtcgatataccattgaagttaatcgagttccagcgggtaat
tgggttctgattgaagggatcgatcagccaatatcgaaaacttcaaccatagtagatgct
agatatgacgatgaacttttcattttcaatccattgaaattcaatactcaatcagtcata
aagattgctgtcgaacctgtcgtcccatctgaattgccaaaaatgttggaaggtttgaga
aaatgtaataaatcatatccattattgggaactcgggtagaagaaagtggagaacatatt
attcttggaaccggagagttgtatctggattgtgtgatgcatgatttgcgcaaaatgtat
tcagaaatcgatattaaagttgccgatcctgtcgtctctttttgtgaaacggtcgtagaa
acttcacagattaaatgctttgccgaaacttcaaataaaaagaataaaataatgatgatt
gcagaaccacttgaaaaaggattagctgaagatattgaaaatgagattgtacagatcggt
tggaatcgtaaaaaattgggagaattttttcaaacgaaatatgattgggatattcttgct
gcacgatcaatatgggcttttggtccaagtaacactggaccaaatatattggtcgatgat
actttaccatctgaagtggataaaaatttgttaaatactgtacgcgattctattgttcag
ggctttcaatgggcatcgagagaagggccattatgtgaagaaccaattcgaaatgttaaa
tttaaaattctcgatgctatcatcagtccggaaccggctgccagaggaggtggacaaatt
attccaactgctcgtcgtgttgcctattcctcttttttaatggctacaccacgacttatg
gaaccatattattttgtcgaagctctagcaccggctgattgtgtatcagctgtttatacg
gttttagcgaaacgtcgtggccacataactcaagatgtaccagttcctggttcgccattg
tacactgtaaaagcttttattcctgcaatagattcttttgggtttgaaacggatctacga
acacatacacaaggccaagcattttgtttatcagtatttcatcattggcagattgttcct
ggcgatccattggacaaatcgattatcatacgaccattagaaccacaaccggcaccacat
ttagccagagaatttatgatcaaaactcgtcgccgtaaaggtttatccgaagatgttagt
atcaataaatttttcgatgatccgatgctactcgaattagccaaacaagatgtactactg
tcttaa
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