Dactylosporangium fulvum: Dfulv_25530
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Entry
Dfulv_25530 CDS
T08473
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
dfu
Dactylosporangium fulvum
Pathway
dfu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Dfulv_25530 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfu03400
]
Dfulv_25530 (nth)
Enzymes [BR:
dfu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Dfulv_25530 (nth)
DNA repair and recombination proteins [BR:
dfu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Dfulv_25530 (nth)
Prokaryotic type
Dfulv_25530 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
SPO22
C7_FIM2_N
Motif
Other DBs
NCBI-ProteinID:
UWP78546
LinkDB
All DBs
Position
complement(5425978..5426718)
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AA seq
246 aa
AA seq
DB search
MPSSRRSATAVEPVAQPSGPDLALKRRARRILRLLTARYPDARLELDFASPLQLLVAAVL
AAQALDERVNAVTPVLFGRFPTAADLAAADPEEMERILVPVGYYRKKTASVIKLAEALVE
RHGGEVPRTVDELVALPSVGRKTANMVLGNAFGTPAVSVDTHVGRVAHRLGWAEEKDVEA
VEQAIRSLFDRKDWVPANLLLILHGRRTCHSRRPACGACPLLAECPSAGPPVKGELDPEE
ARALLK
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
gtgccgtcgtcacgtcgctccgcaacagccgtcgaacccgtcgcccagccgtccggtccc
gatctcgccctgaagcggcgggcccggcggatcctgcggctgctcaccgcccgatacccg
gacgcgcgcctcgagctggacttcgcctccccgctgcaactgctcgtcgcggcggtcctc
gcggcccaggcactcgacgagcgggtcaacgcggtcacgccggtcctgttcggacgcttc
ccgacagccgccgacctcgccgccgccgacccggaggagatggagcgcatcctcgtcccg
gtcggctactaccgcaagaagacggcatcggtcatcaagctcgccgaggcgctggtcgag
cgccacggcggcgaggtgccccggacggtcgacgagctggtcgccctgccgtcggtcggc
cgcaagacggccaacatggtcctcggcaacgccttcggcaccccggcggtctcggtcgac
acccacgtcggccgggtcgcgcaccggctcggctgggccgaggagaaggacgtcgaggcg
gtcgagcaggccatccggtccctgttcgaccgcaaggactgggtcccggccaacctcctg
ctgatcctccacggccgccgcacctgccactcccgccgccccgcctgcggcgcctgcccg
ctgctcgcggagtgcccgtcggccggcccgccggtcaagggcgagctcgaccccgaggag
gcccgcgccctgctcaagtag
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