Deinococcus grandis: DEGR_13100
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Entry
DEGR_13100 CDS
T06640
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
dga
Deinococcus grandis
Pathway
dga00270
Cysteine and methionine metabolism
dga00450
Selenocompound metabolism
dga00670
One carbon pool by folate
dga01100
Metabolic pathways
dga01110
Biosynthesis of secondary metabolites
dga01230
Biosynthesis of amino acids
dga04980
Cobalamin transport and metabolism
dga04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
dga00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
DEGR_13100 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
DEGR_13100 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DEGR_13100 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DEGR_13100 (metH)
04980 Cobalamin transport and metabolism
DEGR_13100 (metH)
Enzymes [BR:
dga01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
DEGR_13100 (metH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
MtrH
PA
Motif
Other DBs
NCBI-ProteinID:
BBN94577
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All DBs
Position
complement(1372574..1376317)
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AA seq
1247 aa
AA seq
DB search
MSTDIRAEARKRILILDGAWGTQLQGAGLTEADFRWDGADPLRMYRGNFDLLQLTRPDVI
RAVHRSYFEAGADIASTNTFNSTTISQADYGTEGMAREMNVQGARLAREVADEFTARDGR
PRWVAGSIGPTNRTATLSPDVERPEFRNVTYDDLVAAYTEAAEGLIEGGADLLLLETVFD
TLNAKAALFACEEAFARTGKTLPVMLSGTITDASGRTLSGQTPEAFAISTSHANLFSLGL
NCALGADLLRPHLREIAANTDALVSVHPNAGLPNAFGEYDETPEHTAGVLADFAREGLVN
IVGGCCGTTPEHIRAIAEAVREITPRVAPEQPPVLRLSGLEPLNVTPELNFVNVGERTNV
TGSPKFAKAILAGDFDAGLKIARQQVENGAQIVDVNFDEGMLDGEAAMVKFLNLLAGEPD
ISRVPLMLDSSKWEILEAALKRVQGKAVVNSISLKDGEAKFLERARLLRRYGAAAVVMAF
DEQGQADNLARRIEITSRAYRLLTEEVGFPAQDIIFDPNVLTVATGIEEHDRYAIDFIEA
TRWIKANLPGALVSGGISNVSFSFRGNNHVREAMHAVFLYHGVRAGLDMGIVNAGMLAVY
EDIEPELRDAVEDVILARRPDATERLLELADRYKGVKREVGAGSPWRDLPVQERLKHALV
QGIADFVDADAEEAYQELGSPLKVIEGPLMDGMNVVGDLFGAGKMFLPQVVKSARVMKRA
VAYLTPYMEAEKQEAGGKGKVLLATVKGDVHDIGKNIVGVVLACNGYQVTDLGVMVPTEK
ILDEAERIGADVIGLSGLITPSLDEMVTVAREMTRRGLTLPLLIGGATTSRAHTAVKIDP
AYPGAVVHVLDASRAVTTTADLLADPAGVQDRVRTEYDALRERHGGRQVRLVPIGTARER
APQLSPTVPPAPREPGRQVIEQPIAELLDFIDWTPFFIAWEMKGIYPNILTDPLRGEEAR
KLFADAQALLQRAIDEKLLTARGVIGLWPARRDGDDIVVAADGRWQMEGGQPSAISHPPS
ARLHTLRQQRDQTTPNAALADFILPDGDHIGAFAVAIHGAEELAAAFEAQHDDYNAILVK
AIADRLAEAFAEKLHRDVRVQHWGYAPDEALGNDDLIRERYQGIRPAPGYPAQPDHTEKR
TLFTLLNAGEVGLTLTESCAMTPAAAVSGLYFAHPEARYLAVGRIGRDQILDYARRKGQS
IEETERWLGPILAYDAGAGEGGRQIADGRAAPSTIDLQPSAAAGGRP
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccgatatccgcgccgaggcgcgcaagagaatcctgattctggacggcgcgtgg
ggcacgcagctccagggggccggactgaccgaggccgacttccgctgggacggcgccgat
cccctgcggatgtaccggggaaacttcgacctgctgcaactgacgaggcccgacgtgatc
cgcgccgtgcaccgctcgtacttcgaggccggggcggacatcgccagcacgaacaccttc
aactccacgacgatcagtcaggcggactacggcacggaaggcatggcgcgcgagatgaac
gtgcagggcgcgcggctggcgcgcgaggtcgccgacgagttcaccgcccgtgacggcagg
ccgcgctgggtggcggggagcatcggcccgacgaaccgcacggcgaccctctcgccggac
gtggaacgcccggaattccgcaacgtcacctacgacgatctggtcgccgcgtataccgag
gccgccgagggcctgatcgagggcggcgccgacctgctgctgctggagacggtgttcgac
acgctgaacgccaaggcggcgctgttcgcctgcgaggaggccttcgcgcgcaccgggaag
acgctgccggtcatgctgtccggcacgatcacggacgcttcgggccgcacgctcagcggg
cagacgccggaagcgttcgcgatcagcacctcgcacgcgaacctgttcagcctgggcctg
aactgcgcgctgggcgctgatctgctgcgcccgcacctgcgcgagatcgccgcgaacacg
gacgcgctggtgtccgtccacccgaacgcgggcctcccgaacgccttcggggagtacgac
gagacgcccgagcacacggcgggcgtgctggccgacttcgcccgcgagggcctcgtgaac
atcgtgggtgggtgctgcggcacgactcctgagcacatccgcgcgattgccgaggcggtg
cgcgagatcacgccgcgcgtggcccccgagcagccccccgtgctgcgcctgagtggcctg
gagccgctgaacgtcacgccggaactgaacttcgtgaacgtcggcgaacggacgaacgtg
accggcagccccaaatttgccaaggcgatcctggccggggacttcgacgcgggcctgaag
atcgcgcggcagcaggtcgagaacggcgcgcagatcgtggacgtgaacttcgacgagggc
atgctcgacggcgaggccgccatggtgaagttcctgaacctgctggccggggaacccgac
atcagccgcgtgccgctgatgctggacagcagcaagtgggagatcctggaggcggccctc
aagcgcgtgcagggcaaggcggtcgtgaactcgatcagcctcaaggacggcgaggcgaag
ttcctggaacgcgcccgtctgctacgccgctacggggcggcggcggtcgtcatggccttc
gacgagcaggggcaggcggacaacctcgcgcggcgcattgagatcacctcgcgcgcgtac
cgcctgctgaccgaggaggtgggtttcccggcgcaggacatcatcttcgacccgaacgtg
ctgaccgtcgccacgggcatcgaggaacacgaccgctacgccatcgacttcattgaggcg
acccgctggatcaaggcgaacctgccgggcgcgctggtctcgggtgggatcagcaacgtg
tcgttctcgttccggggaaacaaccacgtgcgcgaggcgatgcacgcggtgttcctgtac
cacggggtccgcgcggggctggacatgggcatcgtgaacgccggcatgctcgccgtgtac
gaggacattgagcccgaactgcgggacgcggtggaggacgtcatcctggcccgccgcccc
gacgcgaccgagcggctgctggaactcgccgaccgctacaagggcgtgaagcgcgaggtc
ggcgcgggcagcccctggcgggacctgccggtgcaggagcggctgaagcacgcgctcgtg
cagggcatcgcggacttcgtggacgcggacgccgaggaggcgtaccaggaactcggctcg
ccgctgaaggtcatcgaggggccgctgatggacggcatgaacgtcgtcggcgacctgttc
ggcgccgggaagatgttcctcccgcaggtcgtgaagtccgcccgcgtcatgaaacgcgcc
gtggcgtacctcacgccgtacatggaggccgagaagcaggaggccggcggcaagggcaag
gtcttgctggcgaccgtgaagggcgacgtgcacgacatcggcaagaacatcgtcggggtg
gtactggcctgcaacggctatcaggtcaccgacctgggcgtgatggtccccaccgagaag
atcctcgacgaggccgagcggatcggcgcggacgtcatcggcctgagcggcctgatcacc
cccagtctggacgagatggtcaccgtggcccgcgagatgacccgccgcggcctgaccctg
cccctcctgatcggcggggcgaccaccagccgcgcgcacaccgccgtgaagatcgacccc
gcctacccgggggcggtggtgcacgtgctggacgccagccgcgccgtgacgaccaccgcc
gacctgctggccgacccggcgggcgtgcaggatcgcgtccgcaccgagtacgacgcgctg
cgcgaacggcacggcgggcggcaggtgcgcctcgtgcccatcgggacggcccgcgagcgc
gccccgcagctctcccccaccgtcccgccagccccgcgcgaaccgggccgtcaggtcatc
gagcagcccatcgcggagctgctggacttcatcgactggacgccgttcttcatcgcgtgg
gagatgaagggcatctaccccaacatcctcaccgaccccctgcgcggcgaggaagcccgc
aaactcttcgccgacgcgcaggccctcctccagcgcgccatcgacgagaagctcctgacc
gcgcgcggcgtgatcggcctgtggcccgcccggcgcgacggagacgacatcgtggttgcc
gcagatggcaggtggcagatggaaggtgggcagccatccgcgatcagccatccgccttcc
gctcgcctccacaccctgcgccagcagcgcgaccagaccacgccgaacgcggcgctggcg
gacttcatcctgcctgacggggatcacatcggggcgttcgcggtggcgattcacggcgca
gaggaactcgcggcggcgttcgaggcgcagcacgacgattacaacgccattctggtcaag
gcgatcgcggaccgactggcggaagccttcgcggagaaactccaccgggacgtccgcgtg
cagcactggggctacgcgcccgacgaggcgctgggcaacgacgacctgatccgcgagcgc
taccagggcatccgccccgcgcccggctaccccgcgcagcctgaccacaccgagaaacgc
acgctgttcaccctcctgaacgccggggaggtcggcctgaccctgaccgaatcgtgcgcc
atgacgcccgccgccgccgtgtccggcctgtacttcgcgcacccggaagcgcgttacctc
gccgtgggccgcatcggccgcgaccagatcctggactacgcccgccggaagggtcagagc
atcgaggaaaccgaacgctggctgggaccgatcctcgcgtacgacgcgggagcgggggaa
ggcggaaggcagatagcagatggcagggccgcgccttcgaccatcgaccttcagccttct
gcggcggccggaggccgcccatga
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