Desulfoscipio gibsoniae: Desgi_1960
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Entry
Desgi_1960 CDS
T02657
Name
(GenBank) malate dehydrogenase, NAD-dependent
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
dgi
Desulfoscipio gibsoniae
Pathway
dgi00020
Citrate cycle (TCA cycle)
dgi00270
Cysteine and methionine metabolism
dgi00566
Sulfoquinovose metabolism
dgi00620
Pyruvate metabolism
dgi00630
Glyoxylate and dicarboxylate metabolism
dgi00680
Methane metabolism
dgi00710
Carbon fixation by Calvin cycle
dgi00720
Other carbon fixation pathways
dgi01100
Metabolic pathways
dgi01110
Biosynthesis of secondary metabolites
dgi01120
Microbial metabolism in diverse environments
dgi01200
Carbon metabolism
Module
dgi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
dgi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Desgi_1960
00620 Pyruvate metabolism
Desgi_1960
00630 Glyoxylate and dicarboxylate metabolism
Desgi_1960
00566 Sulfoquinovose metabolism
Desgi_1960
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
Desgi_1960
00720 Other carbon fixation pathways
Desgi_1960
00680 Methane metabolism
Desgi_1960
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Desgi_1960
Enzymes [BR:
dgi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 (S)-malate dehydrogenase (NAD+, oxaloacetate-forming)
Desgi_1960
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
Glyco_hydro_4
DAO
MAP7
Motif
Other DBs
NCBI-ProteinID:
AGL01405
UniProt:
R4KLH5
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All DBs
Position
2000250..2001176
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AA seq
308 aa
AA seq
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MKRNKITIIGSGNVGATCAHWAATKELGDIVLMDVVEGVPQGKGLDMQEAAPIEGYDINI
TGTNKYEDTAGSDLVVITAGIARKPGMSRDDLVSTNVKIVQSCAEQAAKFSPNAFIIVVT
NPLDVMVYAAYKASGFPANRVFGMAGVLDSARFRIFIAQELGVSYKDVSAFVLGGHGDDM
VPLVRYSYAGGIPIEKLIPKERIEAIVERTRKGGAEIVNYLKTGSAYYAPGASAIEMVEA
VLKDQKRILPVAAYLNGEYGEKEIYLGVPAIIGGNGVEKILEVDLTEDEKAALQKSIQSV
RNVMTLVK
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaggaataaaattactattattggttccggtaacgttggcgctacttgtgcacat
tgggcggcaaccaaggaattaggcgatattgttctaatggatgtcgtagaaggggtgccc
cagggcaaagggcttgacatgcaggaggccgcgcccattgaaggttatgatattaacatt
acgggcaccaacaaatatgaggatactgccggctccgatctggtggtgataaccgcaggt
attgctcgtaagccggggatgagccgggatgacctggtcagtaccaatgtaaaaatcgta
cagtcttgcgcggaacaagcagctaaattttcccccaacgcttttataattgtggtaact
aatccccttgacgttatggtgtacgcggcttataaagccagcgggttccctgccaaccgg
gtgtttggtatggcaggtgtgctggattcggctcgtttccgtatttttatagctcaggaa
ttaggtgtatcctataaagacgttagcgctttcgttcttggggggcatggtgacgacatg
gtgccactggtacgctatagctacgccggaggtattcccattgaaaaattaattcccaaa
gagcgcattgaagctatagtggaaagaaccagaaagggcggcgcggaaatcgttaactac
ttaaaaacaggcagtgcctattacgcacccggtgcttcagctatagaaatggtggaagct
gttctgaaggatcaaaagcgcatactgccagtggccgcctacttaaatggagaatatggc
gaaaaggagatataccttggtgtaccggctataattggcggtaacggtgtggagaaaatt
cttgaggtggacttaactgaagatgaaaaggccgctttgcaaaagtcaatacagtcggta
agaaatgttatgacactggtaaaataa
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