Dendronephthya gigantea (soft corals): 114527425
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Entry
114527425 CDS
T06112
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
dgt
Dendronephthya gigantea (soft corals)
Pathway
dgt04120
Ubiquitin mediated proteolysis
dgt04140
Autophagy - animal
dgt04144
Endocytosis
dgt04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114527425
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114527425
04140 Autophagy - animal
114527425
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
114527425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dgt04131
]
114527425
04121 Ubiquitin system [BR:
dgt04121
]
114527425
Enzymes [BR:
dgt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114527425
Membrane trafficking [BR:
dgt04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
114527425
Ubiquitin system [BR:
dgt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
114527425
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
U-box
zf-RING_2
TRAF3_RING
zf-C3HC4_4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
Sina_ZnF
TolA_bind_tri
CEP104_ZnF
RING_XB3-XBAT31
TRAF_BIRC3_bd
Tmemb_cc2
zf-TRAF_2
CASP_C
Motif
Other DBs
NCBI-GeneID:
114527425
NCBI-ProteinID:
XP_028404860
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MSNRHYRNLAHQAVNIMNEEQEAYVESPSLPANLPPQADNNAERGNSAANSGESDQARVP
ASDQAIAANAENLDRVDGYDEVFDQNVSADFECPICMLVLRNPVQTGCGHRFCGACINRH
LANVHTCPIDNQQLDPSEINADNFAKREIYMLRVKCRTVKNEKECPWIGCLKDVEEHLKT
CPFVEAPCPKGCNQNVERKALDHHLKKECPKRTTTCTHCKTEVLHKNYKDHYGKCQKVVV
PCPNCKQKMLREKLVAGHEKECPKGQAVCDFKSYGCKWTGQRFNLQNHLNNEIQLHLSML
CAALAVLLPQNGKEKSKGAASGGASASANGNGTVSATVLEEFNRQRNKNTEAIATLEAKL
VEMERKYRELRGRTERQQRDNESGVTALKNTVIDLEARMCNGVYLWRIEGYPTHLENARE
NVVTALHSPPFYTSFYGYKLCLRINPNGVDTGYGTHVSLFVHMMQSPWDDTLEWPFSGRI
SLSILDQSDDGDYKRHISETLVTRPNLLAFQRPTTPRNHKGYGYVEFAHIETLQDRQYVK
NDCLLVRVQVFQ
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatcgtcattaccggaatctcgcacaccaagcggtaaacataatgaatgaggaa
caggaggcctatgtggaaagtccaagtcttccagcgaatctaccacctcaggcagacaac
aatgcagaacgcggtaattcagcggccaatagcggagaaagtgaccaagcgagagttccg
gcaagtgaccaagcaatcgccgccaatgctgagaacttagatagggtcgatggttatgat
gaagtttttgatcaaaacgtgagcgcagattttgaatgtcccatatgtatgctggtatta
cgtaatcctgttcaaacaggatgtggacatcgcttttgtggagcgtgcatcaatagacac
ttggcaaacgttcacacttgcccaattgacaaccaacagctggacccgagcgagataaac
gctgataattttgctaagagggaaatatatatgcttcgtgttaaatgtcggactgtaaag
aacgaaaaggaatgcccttggatcggatgcctgaaagacgttgaggaacatttaaaaact
tgtccatttgtggaagcgccatgtccgaaagggtgtaatcaaaatgtagagaggaaagcg
ttggaccatcatttgaagaaggaatgtccaaaacgaacaacaacctgtacacattgcaag
actgaagtgctccataagaactacaaggatcattatggaaagtgccaaaaagtagttgtt
ccttgtcccaattgtaaacagaagatgctgcgagaaaagttggttgctggacatgaaaag
gagtgtcccaaaggacaggctgtgtgtgattttaaatcgtatggatgcaagtggacgggg
cagcgatttaatctccaaaaccatctaaacaacgaaatacagttacatttgtccatgctg
tgcgctgctttagccgtattgttacctcaaaacggaaaggaaaagagcaaaggtgctgcc
agtggaggtgctagtgcaagtgcaaatggcaatggtactgtgagcgcgaccgtcttagag
gagttcaatcgtcaacgtaacaaaaacactgaggctattgcaactttggaagccaagctg
gtggaaatggagcgaaaatatcgtgaactaagaggccgcactgaaagacaacaaagggat
aatgaatctggcgtgacagctttgaagaatactgtaattgatctggaagcacgtatgtgc
aatggagtctacctgtggaggatagaggggtatccaactcatctagaaaacgctcgcgag
aatgttgttacagcattgcacagccctccattttataccagtttctatggctacaagtta
tgcctcagaatcaacccaaacggagtggatactggctatggtactcatgtttctttgttt
gttcatatgatgcagtcaccctgggacgatactctggagtggcccttttcaggcaggatc
tccctttccattcttgaccaaagtgatgatggagattacaaacgtcatatcagcgaaacg
ttggtcaccaggcctaatcttttggcatttcaaagaccaaccactccccgaaatcacaaa
ggctatggatatgtggagttcgcccatatcgagacattgcaggatcggcaatacgttaaa
aatgactgtcttctggttcgcgttcaagtttttcagtga
DBGET
integrated database retrieval system
