Desulfobacter hydrogenophilus: EYB58_13875
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Entry
EYB58_13875 CDS
T10839
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
dhg Desulfobacter hydrogenophilus
Pathway
dhg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dhg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EYB58_13875 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dhg03400
]
EYB58_13875 (nth)
Enzymes [BR:
dhg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EYB58_13875 (nth)
DNA repair and recombination proteins [BR:
dhg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EYB58_13875 (nth)
Prokaryotic type
EYB58_13875 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
DUF2400
HHH_8
DUF3349
Motif
Other DBs
NCBI-ProteinID:
QBH13916
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All DBs
Position
3107792..3108439
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AA seq
215 aa
AA seq
DB search
MEQVSNFVSIIIERLKAHYPVVNTQLDHTNPFELLIATILSAQCTDNQVNKVTTVLFARY
PDPDALAGANLDDIKKIIFSTGFYNNKAKNIKACANKIQKEFNGKVPRGINALTSLPGVG
RKTANVVRSVCFNIPTIVVDTHVLRVSRRLGLTRATDSVKVEFELMDILPKTVWNDIGLQ
FIYFGRQICHARKPACNRCFFNDLCPFALTALPDA
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggtatccaactttgtgtcgattattattgaaaggctaaaagcacactatccg
gttgtcaatacacaacttgatcacaccaatccctttgagctgctcattgcaaccatcctg
tctgcccagtgcacggataatcaggtgaacaaggtgacaacagtgttgtttgcacgctac
cctgatccagatgcccttgccggcgcaaaccttgatgacataaaaaaaataattttttcc
accggcttttacaataataaggcgaaaaatatcaaggcctgtgcaaataaaattcaaaaa
gagttcaatggaaaggtcccccggggtatcaatgcattgaccagtctgcccggtgtggga
agaaaaaccgccaatgtggtccggtccgtctgtttcaatatcccgaccattgtggtggat
acccatgtgctgcgggtgtcaaggcgtctggggcttacccgtgcgacggattcggtcaaa
gtggagtttgagctgatggatattttacccaagacggtgtggaacgatatcgggctgcag
tttatttattttggccgtcaaatctgccatgcaagaaagcctgcgtgcaaccggtgtttt
tttaatgacttgtgcccgtttgctttgacagccttgcctgatgcatga
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