Desulfobacter hydrogenophilus: EYB58_20120
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Entry
EYB58_20120 CDS
T10839
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
dhg Desulfobacter hydrogenophilus
Pathway
dhg01501
beta-Lactam resistance
dhg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dhg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EYB58_20120
01503 Cationic antimicrobial peptide (CAMP) resistance
EYB58_20120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dhg03036
]
EYB58_20120
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dhg02000
]
EYB58_20120
01504 Antimicrobial resistance genes [BR:
dhg01504
]
EYB58_20120
Chromosome and associated proteins [BR:
dhg03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
EYB58_20120
Transporters [BR:
dhg02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
EYB58_20120
Antimicrobial resistance genes [BR:
dhg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EYB58_20120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
RND-MFP_C
HH_MFP_RND
Beta-barrel_RND
BSH_CzcB
BSH_CusB
Beta-barrel_RND_2
HH_EMRA
YknX_C
Biotin_lipoyl
HH_YBHG
HH_AAEA_pHBA
BSH_LcnD
ARM_TT21_5th
INTS7_HB
SyrA
T2SSM
TarH
Motif
Other DBs
NCBI-ProteinID:
QBH15019
UniProt:
A0A328FIH4
LinkDB
All DBs
Position
complement(4524974..4526116)
Genome browser
AA seq
380 aa
AA seq
DB search
MVKAIGKVVIAIVLIGVGYFISLFIPSGGPPPGMMGMGEMPPPAVIAVELKERPLDVLDD
HIATVEPVQEVMVRSEVAGYIDDVHFTEGSFVEAGDLLFTIDQKQYQAMVEVREAELARA
KAELDRAEKFLKRMREANKRSVSQSDLDTAESDQLQAVANLKQAAANLNLARIDLGYAKV
RAPISGRIGMAKVTKGNYVTSASGELARIVQTSPIRVVFSMTDRDYLDFRARELAGTADG
LVAHIRLPNGTQLPLVGKKEFDDNVMNSETGTMAVRYLFDNPDGRLVPGGYVNILLGLRQ
RPMGIRIPQRARLLDPQGSYVLTVNGEGQVGTARIEIGESVEGDFVVLSGLKAGDRIVVD
GVQKARPGMTAQVTLQEAGK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaggcaatcggaaaagtggttatcgcgatagttctgatcggcgtgggctatttt
atcagtctgtttattccgtcaggcggaccgccgccgggcatgatgggtatgggtgaaatg
ccgccacccgcggtgatcgccgttgagctgaaggaacggccgctggatgtgctcgacgac
catattgcaacggtcgagccggtgcaggaggtcatggtccgttcggaagttgcgggctac
attgacgatgtccatttcacggaaggttcttttgtggaagcgggtgacctgctcttcacc
atcgatcagaaacaatatcaggccatggttgaagtgcgcgaggccgagctggcccgtgcc
aaagccgaactggaccgcgccgaaaaattcctcaaacgtatgcgtgaggcgaataaacgc
agcgtttcacagtcggatctcgacactgcggaaagcgaccaattgcaggccgtggccaac
ctgaaacaggcggcggccaacctgaacctggccaggattgacttgggttatgcaaaagtg
cgcgcgccgatcagcggccgcatcggcatggccaaagtgaccaagggcaattatgtcact
tccgcctccggcgaacttgcccgcatagtacagaccagtccgatccgtgtggtcttttcg
atgaccgaccgcgattatttggacttccgtgctcgggagttagcaggcaccgccgacggc
ctggttgcccacattcgtctgccgaacggaacgcagcttccgctagtcggcaagaaggag
ttcgacgataacgttatgaattccgaaaccggcaccatggcggtccgctacttgttcgat
aatcccgacgggcgactggtccccggcggttacgtcaacattctgctcggtttgcggcaa
cgccccatgggcatccgtattccccaacgggcacggctgcttgatccgcagggatcctat
gtgctgacggttaacggggagggacaggtcggtaccgcccgcattgaaatcggtgaatca
gttgaaggcgactttgtggtgctttccggactgaaggccggcgaccgtatcgtggttgac
ggtgtacaaaaagcccggccgggtatgactgcccaggttactttgcaggaggccggaaaa
tga
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